Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AP002802.2-201ENST00000605877 235 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 AC116312.1-201ENST00000606841 314 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 AC009318.2-201ENST00000610917 651 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 AL158163.2-201ENST00000619110 700 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 AC131280.1-202ENST00000624067 4211 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 AL354685.2-201ENST00000448218 1447 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 SNORA63.3-201ENST00000362682 132 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 RNU6-1122P-201ENST00000384449 107 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 MRPS36P1-201ENST00000421291 307 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 AC013262.1-201ENST00000426710 252 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 RPL30P4-201ENST00000429309 333 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 AC010095.1-201ENST00000443543 144 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 ARPC3P5-201ENST00000448802 534 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 PMCHL2-203ENST00000457791 237 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 OR6C7P-201ENST00000547875 934 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 AC007375.1-201ENST00000554513 578 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 AC110588.1-201ENST00000559699 137 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 MIR4287-201ENST00000579398 78 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 AC002545.1-201ENST00000592511 181 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 BBIP1P1-201ENST00000602999 279 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 AC005034.5-201ENST00000604219 466 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 AC009237.15-201ENST00000610252 501 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 AC104763.3-201ENST00000613765 618 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 AC010133.1-201ENST00000615809 842 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 PISRT1-201ENST00000626175 531 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 U2.21-201ENST00000637295 81 ntBASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.46□□□□□ -2.18
TRAV41A0A0B4J266 AC110491.1-201ENST00000562191 2010 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AC002543.1-201ENST00000299783 1954 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 RNU6-97P-201ENST00000363387 104 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 SNORA16.1-201ENST00000364597 132 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 SNORA40.18-201ENST00000391200 128 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 USP9YP13-201ENST00000417797 480 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 HMGN2P3-201ENST00000433603 273 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 HMGN2P5-201ENST00000436882 273 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 MTND5P14-201ENST00000441481 1267 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 MTND1P31-201ENST00000449206 961 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 RPL21P134-201ENST00000453468 483 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 RPL23AP42-201ENST00000471152 471 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AC021382.1-201ENST00000483523 359 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AC107032.1-201ENST00000485945 480 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AC007182.2-201ENST00000489251 402 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AF213884.2-201ENST00000510417 903 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AC107393.1-201ENST00000512403 346 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 RNU6-1028P-201ENST00000517164 93 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 MTCO2P15-201ENST00000532655 656 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AC126365.2-201ENST00000580630 379 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 MIR3935-201ENST00000583472 104 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AL353997.4-201ENST00000586196 166 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AC008507.2-201ENST00000588402 1176 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AP001269.3-201ENST00000588718 329 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AL158827.2-201ENST00000602494 330 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AC005296.1-201ENST00000616145 209 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AL512427.1-201ENST00000618593 349 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 AL691447.3-201ENST00000635020 330 ntBASIC1.45□□□□□ -2.18
TRAV41A0A0B4J266 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 RNU6-1159P-201ENST00000362933 107 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 MIR676-201ENST00000390702 67 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 U8.14-201ENST00000390843 143 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 SNORA40.2-201ENST00000390847 128 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 RN7SKP284-201ENST00000411002 343 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 NDUFS5P4-201ENST00000412983 318 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms