Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
GTF3C3Q9Y5Q9 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.71□□□□□ -1.49
GTF3C3Q9Y5Q9 AC091152.2-201ENST00000591628 2569 ntBASIC5.71□□□□□ -1.49
GTF3C3Q9Y5Q9 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 DLEU2_6.3-201ENST00000340052 136 ntBASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 RNU4-76P-201ENST00000364509 141 ntBASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 RNA5SP252-201ENST00000391131 119 ntBASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 AC114801.2-201ENST00000503825 781 ntBASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 AK3P2-201ENST00000507976 429 ntBASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 SMURF2P1-201ENST00000514992 481 ntBASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 FRG2DP-202ENST00000566967 323 ntBASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 AC124303.1-201ENST00000605703 360 ntBASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 AC126177.8-201ENST00000618339 1015 ntBASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 DLEU2_6.2-201ENST00000620994 136 ntBASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GTF3C3Q9Y5Q9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 SNURFL-201ENST00000309296 343 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 Y_RNA.58-201ENST00000362807 102 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 Y_RNA.154-201ENST00000363624 102 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 RNY3P1-201ENST00000365085 102 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 RNY3-201ENST00000365484 102 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 Y_RNA.490-201ENST00000384413 102 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 AL030996.1-201ENST00000411430 235 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 RPL23AP26-201ENST00000412728 464 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 AC245054.2-201ENST00000415639 319 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 AC005300.1-201ENST00000428401 373 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 AC012308.1-201ENST00000451232 178 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 AL031183.1-201ENST00000457667 207 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 U8.21-201ENST00000459536 136 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 RNU6-1016P-201ENST00000516689 94 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 SNORD59.2-201ENST00000516873 68 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 SNORA31.21-201ENST00000517180 77 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 MIR4271-201ENST00000582451 67 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 AL161423.1-201ENST00000613700 262 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 MIR6071-201ENST00000616741 78 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 PISRT1.1-201ENST00000616930 107 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 AL773545.4-201ENST00000637262 310 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 AL513478.4-201ENST00000641636 310 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 AC007496.3-201ENST00000624987 3443 ntBASIC5.7□□□□□ -1.5
GTF3C3Q9Y5Q9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 RN7SKP275-201ENST00000364626 301 ntBASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 Y_RNA.315-201ENST00000365117 102 ntBASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 RNU6-827P-201ENST00000365553 106 ntBASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 MTCYBP4-201ENST00000401524 249 ntBASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 RBMY1KP-201ENST00000423480 476 ntBASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 HIGD1AP11-201ENST00000438361 280 ntBASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 AC013470.1-201ENST00000453438 462 ntBASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 AC018437.1-201ENST00000492214 406 ntBASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 AC116655.1-201ENST00000508324 901 ntBASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 AC133104.2-201ENST00000615272 193 ntBASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 AL391261.4-201ENST00000616012 481 ntBASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 AC004944.1-201ENST00000517807 3059 ntBASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GTF3C3Q9Y5Q9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GTF3C3Q9Y5Q9 AL158163.1-201ENST00000603915 1649 ntBASIC5.68□□□□□ -1.5
GTF3C3Q9Y5Q9 RPL9P7-201ENST00000330965 580 ntBASIC5.68□□□□□ -1.5
GTF3C3Q9Y5Q9 RNU6-78P-201ENST00000362897 107 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms