Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 AC007785.2-201ENST00000598627 1916 ntBASIC3.31□□□□□ -1.88
CLDN16Q9Y5I7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 FRG1CP-201ENST00000358464 769 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 RNU6-534P-201ENST00000364877 106 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 MIR200C-201ENST00000384980 68 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 UBE2V1P2-201ENST00000397758 440 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AL139397.2-201ENST00000404529 772 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 RNA5SP38-201ENST00000410750 119 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 RNU6-1068P-201ENST00000410958 103 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AC080125.1-201ENST00000414888 684 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 OR6C66P-201ENST00000414917 930 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AC093578.1-201ENST00000415219 368 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 RPL7P46-201ENST00000425129 740 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AC006989.1-201ENST00000427212 131 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AL592045.1-201ENST00000429867 352 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 RPL31P58-201ENST00000469001 379 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 RPS15AP34-201ENST00000487776 387 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 RPL30P5-201ENST00000494923 336 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 PCBP2P3-201ENST00000509726 843 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 RNU6-1178P-201ENST00000516674 107 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 RN7SKP219-201ENST00000516825 296 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 HIF1AP1-201ENST00000553642 175 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AL138889.2-201ENST00000603883 242 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AC002553.4-201ENST00000616896 331 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AC024940.5-201ENST00000622889 474 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AP003355.3-201ENST00000623465 114 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AP003122.6-201ENST00000623831 495 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AL512643.1-201ENST00000635735 524 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 MTND1P37-201ENST00000636562 264 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 AL356274.2-201ENST00000624379 3752 ntBASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN16Q9Y5I7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 FAM35BP-202ENST00000497389 3337 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 RNU6-552P-201ENST00000362869 119 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 MIR490-201ENST00000384865 128 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 SNORD17-201ENST00000390930 237 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 RNU6-550P-201ENST00000391057 101 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 AL606923.1-201ENST00000406616 190 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 RNU6-908P-201ENST00000410160 94 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 GPM6BP2-201ENST00000432046 144 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 AL512844.2-201ENST00000433990 593 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 GPM6BP1-201ENST00000446387 144 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 AL118520.1-201ENST00000450770 291 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 TRBV1-201ENST00000476502 284 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 AC110768.1-201ENST00000509222 400 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 APOOP4-201ENST00000513530 597 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 AC026333.2-201ENST00000542164 106 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 TRAV28-201ENST00000557548 323 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 AL161798.1-201ENST00000604630 131 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 DISC2.1-201ENST00000612827 205 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 AL138880.2-201ENST00000616214 239 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 AL357559.1-201ENST00000622228 274 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 MIR3662-201ENST00000637030 95 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 AC068647.1-201ENST00000489539 2265 ntBASIC3.29□□□□□ -1.88
CLDN16Q9Y5I7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms