Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 RNU6-1314P-201ENST00000517139 104 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 BTF3P12-201ENST00000519620 469 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AP000857.1-201ENST00000532151 543 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 SETP7-201ENST00000552169 453 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AL355375.2-201ENST00000574825 175 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 MIR3200-201ENST00000580767 85 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AC010591.1-201ENST00000603941 649 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AC005034.5-201ENST00000604219 466 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AC006329.2-201ENST00000611491 394 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 U73479.1-201ENST00000618062 168 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 TPTEP1-208ENST00000636884 213 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 AC009093.8-201ENST00000641769 292 ntBASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHGB1Q9Y5G3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 MTND5P27-201ENST00000428871 1720 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 AL139276.1-201ENST00000311910 1001 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 RNVU1-3-201ENST00000364313 161 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU6-522P-201ENST00000364497 107 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 MIR454-201ENST00000390180 115 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 AC092447.6-201ENST00000414578 210 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 NDUFB4P5-201ENST00000415445 361 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 OR1AA1P-201ENST00000419597 916 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 AC005517.2-201ENST00000424673 553 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 DUTP6-201ENST00000425573 462 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 OR2AS1P-201ENST00000427827 319 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 MED13P1-201ENST00000428342 171 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 VDAC1P3-201ENST00000434069 851 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 AC024082.2-201ENST00000434771 238 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 RPL7P12-201ENST00000446719 750 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 MTND3P16-201ENST00000452205 344 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 TTC39CP1-201ENST00000512513 755 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 Y_RNA.665-201ENST00000516177 98 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU6-64P-201ENST00000517119 105 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 HMGB1P41-201ENST00000520234 440 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 SYF2P1-201ENST00000550658 413 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 MIR4742-201ENST00000581069 85 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 MIR4775-201ENST00000581168 75 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 AC022432.1-201ENST00000595739 310 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 HMGN2P28-201ENST00000606102 262 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU6-89P-201ENST00000606519 100 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 FRG1KP-201ENST00000623592 341 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 AL034408.1-202ENST00000636088 415 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 SRP72P2-201ENST00000344851 1979 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 ZNF285B-201ENST00000561698 1767 ntBASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PCDHGB1Q9Y5G3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 AC007656.2-201ENST00000624902 4547 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 HSPE1P11-201ENST00000339579 310 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 MIR148B-201ENST00000362252 99 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU6-600P-201ENST00000362524 99 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU6-552P-201ENST00000362869 119 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 SNORA62.1-201ENST00000364287 154 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 Y_RNA.231-201ENST00000364358 102 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU6-38P-201ENST00000384085 107 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU6-903P-201ENST00000391270 109 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 RN7SKP32-201ENST00000410167 303 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 RN7SKP156-201ENST00000410308 342 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU6-193P-201ENST00000410977 107 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 RPL35AP12-201ENST00000425362 338 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms