Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SRGNP1-201ENST00000603392 451 ntBASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 AP001330.4-201ENST00000604350 154 ntBASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 AC011155.2-201ENST00000623202 216 ntBASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 AC025034.2-201ENST00000623264 286 ntBASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 AC134503.1-201ENST00000633048 54 ntBASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 BDP1P-201ENST00000582658 1990 ntBASIC4.33□□□□□ -1.72
CTDP1Q9Y5B0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 MTCO1P12-201ENST00000414273 1543 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 RNU6-188P-201ENST00000364207 107 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 Y_RNA.333-201ENST00000365274 102 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 SNORA70.4-201ENST00000365509 134 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 Y_RNA.414-201ENST00000384011 101 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 RNU6-1297P-201ENST00000384415 104 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 Y_RNA.579-201ENST00000390939 94 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 AL583834.1-201ENST00000406943 343 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 RPL7L1P10-201ENST00000427790 463 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 AC087650.1-201ENST00000431445 468 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 RPL36AP6-201ENST00000435770 321 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 AC005094.1-201ENST00000440420 368 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 PRPS1P1-201ENST00000445305 876 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 snoU109.4-201ENST00000458953 143 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 SNORD97-201ENST00000459187 142 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 KLHL2P1-201ENST00000508691 521 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 SYF2P1-201ENST00000550658 413 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 AP000942.4-201ENST00000604811 241 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 AL034351.1-201ENST00000605288 668 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 SNORA62.6-201ENST00000606322 83 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 AC092807.2-201ENST00000609367 243 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 AL390240.1-201ENST00000612950 384 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 AC093838.1-201ENST00000613014 469 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 AC018555.1-201ENST00000567548 1980 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 ZNF962P-201ENST00000443465 3140 ntBASIC4.32□□□□□ -1.72
CTDP1Q9Y5B0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 U3.12-201ENST00000364498 214 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 RNA5SP51-201ENST00000364750 119 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 RNU6-637P-201ENST00000384050 107 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 RNU6-43P-201ENST00000384302 107 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 SNORA24.1-201ENST00000384401 135 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 Y_RNA.493-201ENST00000384422 102 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 RNA5SP424-201ENST00000390988 115 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 AL109755.1-201ENST00000401791 649 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 AL359634.1-202ENST00000404721 284 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 MIR548P-201ENST00000408336 84 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 AC114491.1-201ENST00000416095 246 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 BEND7P1-201ENST00000422058 457 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 AC010655.1-201ENST00000449336 292 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 CYCSP35-201ENST00000451978 304 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 RNU6-1208P-201ENST00000459588 107 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 AC083904.1-201ENST00000487828 231 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 AC110768.1-201ENST00000509222 400 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 SNORA25.17-201ENST00000517184 124 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 AC007991.1-201ENST00000522680 631 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 DEFB108D-201ENST00000527787 222 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 AL118558.2-201ENST00000556294 238 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 MIR4293-201ENST00000584305 78 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 POLR3GP2-201ENST00000588366 668 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 AL031176.1-201ENST00000604554 466 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 CTHRC1P1-201ENST00000605383 469 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 MAPK10-253ENST00000641010 4072 ntBASIC4.31□□□□□ -1.72
CTDP1Q9Y5B0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 267.4 ms