Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 NACAP2-201ENST00000318548 624 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 RNU6-289P-201ENST00000364093 107 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 RNU6-853P-201ENST00000364306 107 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 U3.12-201ENST00000364498 214 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 RNU6-413P-201ENST00000384115 107 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 RNU6-658P-201ENST00000384606 106 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 AL445529.1-201ENST00000398713 389 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 MIR1302-8-201ENST00000408342 128 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 U3.40-201ENST00000408706 208 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 MTCO1P17-201ENST00000411522 491 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 AIMP1P2-201ENST00000425294 312 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 HMGB1P27-201ENST00000431429 603 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 RPS15AP28-201ENST00000435088 386 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 CYP2C59P-201ENST00000457790 269 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 AC055731.1-201ENST00000474387 401 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 AC104435.1-201ENST00000483483 166 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 AC079804.2-201ENST00000490376 200 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 RN7SL636P-201ENST00000497504 294 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 AC079395.1-201ENST00000510981 262 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 MIR514B-201ENST00000516774 80 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 RNU2-19P-201ENST00000517288 84 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 AC105137.2-201ENST00000569073 466 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 AC006023.1-201ENST00000603944 259 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 AL138963.2-201ENST00000605137 226 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 MIR5739-201ENST00000619803 80 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 SDR42E1P4-201ENST00000620894 481 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 AL031601.2-202ENST00000622650 282 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2□□□□□ -2.09
RHBDD3Q9Y3P4 AC008555.8-201ENST00000623602 2168 ntBASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 AL359634.1-202ENST00000404721 284 ntBASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 HMGB1P11-201ENST00000413899 637 ntBASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 ZNF90P2-204ENST00000419323 1075 ntBASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 AC108729.1-201ENST00000487812 947 ntBASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 RNA5SP24-201ENST00000516478 95 ntBASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 DUXAP1-201ENST00000556632 463 ntBASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 SNORD53-201ENST00000579969 78 ntBASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 MIR3162-201ENST00000581818 82 ntBASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 MIR5007-201ENST00000583098 95 ntBASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 NRBF2P1-201ENST00000587407 859 ntBASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 AC026790.2-201ENST00000606282 430 ntBASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 AL133445.2-201ENST00000611191 527 ntBASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 MIR6766-201ENST00000622641 72 ntBASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 AC007490.1-201ENST00000624321 703 ntBASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 CTSLP2-204ENST00000629029 392 ntBASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
RHBDD3Q9Y3P4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 SNORA16B-201ENST00000364674 135 ntBASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 CIR1P3-201ENST00000405137 479 ntBASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 AC104651.1-201ENST00000427559 735 ntBASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 RPL7P34-201ENST00000433316 712 ntBASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 UBE2FP3-201ENST00000436366 524 ntBASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 AP001324.2-201ENST00000461163 319 ntBASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 AC114781.4-201ENST00000513707 639 ntBASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 SNORA31.3-201ENST00000516029 96 ntBASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 AC010376.1-201ENST00000522101 334 ntBASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 AP001646.1-201ENST00000527936 915 ntBASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 MIR3126-201ENST00000577443 74 ntBASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 AC006270.3-201ENST00000605967 1036 ntBASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 AL162373.1-201ENST00000620433 407 ntBASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 AC243829.7-201ENST00000633081 225 ntBASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.98□□□□□ -2.09
RHBDD3Q9Y3P4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 UBE2L2-201ENST00000254302 429 ntBASIC1.97□□□□□ -2.09
RHBDD3Q9Y3P4 RNU1-91P-201ENST00000364746 163 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms