Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 MIR325-201ENST00000385260 98 ntBASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 RPL17P36-201ENST00000420302 549 ntBASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 EIF4EP2-201ENST00000422816 654 ntBASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 AC133473.1-201ENST00000455173 299 ntBASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 RN7SL319P-201ENST00000480656 221 ntBASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 AC093852.1-201ENST00000503587 266 ntBASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 AC007016.1-201ENST00000512110 244 ntBASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 AC015795.1-201ENST00000513669 327 ntBASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 RNU6-612P-201ENST00000516909 102 ntBASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 MIR4443-201ENST00000585052 53 ntBASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 AC078899.3-201ENST00000599065 212 ntBASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 SRGNP1-201ENST00000603392 451 ntBASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 AC007785.2-201ENST00000598627 1916 ntBASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.13□□□□□ -1.75
SF3B6Q9Y3B4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 SNORD50.1-201ENST00000362987 71 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 Y_RNA.214-201ENST00000364201 112 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 RNA5SP428-201ENST00000365129 132 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 RNA5SP22-201ENST00000365393 109 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 RNU6-700P-201ENST00000391043 107 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 ELOCP20-201ENST00000422460 345 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 AC011753.3-201ENST00000443436 406 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 AC073910.1-201ENST00000445047 438 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 BX284632.1-201ENST00000478218 541 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 AC078817.1-201ENST00000492623 435 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 AC104164.2-201ENST00000496953 495 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 RNU6-397P-201ENST00000516226 104 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 RNY3P15-201ENST00000516297 97 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 RNU6-388P-201ENST00000517012 105 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 RNU6-389P-201ENST00000517048 105 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 IGHV3-76-201ENST00000522465 295 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 AMZ2P1-203ENST00000565833 850 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 AC091178.1-203ENST00000584586 279 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 AC125232.2-201ENST00000592457 143 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 RAC1P9-201ENST00000604990 392 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 AL442067.1-201ENST00000613261 223 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 AC099506.2-201ENST00000623074 221 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 CR381572.2-201ENST00000624852 397 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 AC112200.1-201ENST00000625015 234 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 AC010300.1-201ENST00000600671 5134 ntBASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SF3B6Q9Y3B4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 MAPK10-286ENST00000641208 8747 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 AL359693.1-201ENST00000614959 2407 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 RNU6-600P-201ENST00000362524 99 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 Y_RNA.26-201ENST00000362539 101 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 RNU6-472P-201ENST00000384299 107 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 Y_RNA.551-201ENST00000384661 102 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 MIR93-201ENST00000385024 80 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 RNA5SP494-201ENST00000410653 129 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 AC016769.2-201ENST00000414815 475 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 AC007098.1-201ENST00000420122 367 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 AC098614.2-201ENST00000426040 255 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 SNRPEP9-201ENST00000436794 238 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms