Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CDH9Q9ULB4 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.41□□□□□ -2.02
CDH9Q9ULB4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
CDH9Q9ULB4 AC092125.1-201ENST00000562568 1995 ntBASIC2.4□□□□□ -2.02
CDH9Q9ULB4 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AL139276.1-201ENST00000311910 1001 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 RNU6-778P-201ENST00000363269 103 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 RNU1-51P-201ENST00000365345 176 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 SNORA70B-201ENST00000384210 135 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AL359634.1-202ENST00000404721 284 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AC084290.1-201ENST00000434995 374 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 UBE2D3P1-201ENST00000436669 444 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AC005094.1-201ENST00000440420 368 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AC233279.1-201ENST00000455300 423 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 RNU7-26P-201ENST00000458980 63 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 NDUFB4P2-201ENST00000509515 391 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 HMGB3P3-201ENST00000510526 400 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AC026464.5-201ENST00000562497 722 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AC136618.2-201ENST00000575091 400 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 MIR1273D-201ENST00000577266 86 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 DPPA3P3-201ENST00000603842 430 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AC097468.3-201ENST00000607956 456 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AC007349.4-201ENST00000608114 532 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AL356596.1-201ENST00000624230 379 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AC010889.1-201ENST00000566193 2666 ntBASIC2.4□□□□□ -2.03
CDH9Q9ULB4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CDH9Q9ULB4 AC004944.1-201ENST00000517807 3059 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CDH9Q9ULB4 AC010329.5-201ENST00000623497 2174 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CDH9Q9ULB4 AC131280.1-202ENST00000624067 4211 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 ZNF29P-201ENST00000225587 168 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CDH9Q9ULB4 MIR144-201ENST00000384886 86 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 MIR221-201ENST00000385135 110 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CDH9Q9ULB4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 RNU6-757P-201ENST00000410334 100 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 RN7SKP223-201ENST00000410582 62 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 RNU6-1328P-201ENST00000410938 106 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH9Q9ULB4 RPL26P27-201ENST00000414397 437 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.39□□□□□ -2.03
CDH9Q9ULB4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.39□□□□□ -2.03
CDH9Q9ULB4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.39□□□□□ -2.03
CDH9Q9ULB4 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH9Q9ULB4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH9Q9ULB4 MTND2P39-201ENST00000457230 764 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 RBM43P1-201ENST00000476891 1081 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 AC055855.1-201ENST00000489563 579 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 RNA5SP165-201ENST00000517142 115 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.39□□□□□ -2.03
CDH9Q9ULB4 AC098826.3-201ENST00000603823 466 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 AL161798.1-201ENST00000604630 131 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CDH9Q9ULB4 AL589743.7-201ENST00000612637 233 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 MIR6895-201ENST00000613497 78 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.39□□□□□ -2.03
CDH9Q9ULB4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.39□□□□□ -2.03
CDH9Q9ULB4 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH9Q9ULB4 AC004520.1-201ENST00000608362 1413 ntBASIC2.39□□□□□ -2.03
CDH9Q9ULB4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDH9Q9ULB4 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CDH9Q9ULB4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CDH9Q9ULB4 U8.2-201ENST00000363156 134 ntBASIC2.38□□□□□ -2.03
CDH9Q9ULB4 RNU6-1083P-201ENST00000384022 107 ntBASIC2.38□□□□□ -2.03
CDH9Q9ULB4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDH9Q9ULB4 AL139397.2-201ENST00000404529 772 ntBASIC2.38□□□□□ -2.03
CDH9Q9ULB4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH9Q9ULB4 RNU2-68P-201ENST00000410878 191 ntBASIC2.38□□□□□ -2.03
CDH9Q9ULB4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.38□□□□□ -2.03
CDH9Q9ULB4 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.38□□□□□ -2.03
CDH9Q9ULB4 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.38□□□□□ -2.03
CDH9Q9ULB4 AL139415.2-201ENST00000431968 163 ntBASIC2.38□□□□□ -2.03
CDH9Q9ULB4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.38□□□□□ -2.03
CDH9Q9ULB4 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.38□□□□□ -2.03
CDH9Q9ULB4 COX6CP12-201ENST00000446748 202 ntBASIC2.38□□□□□ -2.03
CDH9Q9ULB4 AL353705.4-201ENST00000449661 238 ntBASIC2.38□□□□□ -2.03
CDH9Q9ULB4 RPL23AP35-201ENST00000451906 501 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms