Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AL360271.2-201ENST00000447710 161 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 SNRPGP5-201ENST00000456003 220 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 RNA5SP246-201ENST00000458909 119 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 AC104472.2-201ENST00000469035 601 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 AC104164.2-201ENST00000496953 495 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 MTND3P25-201ENST00000509243 135 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.75□□□□□ -1.65
DDX41Q9UJV9 AP005597.4-201ENST00000526762 229 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 OR5D17P-201ENST00000531492 978 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 AC093249.1-201ENST00000567049 203 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 AC034105.4-201ENST00000568304 277 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.75□□□□□ -1.65
DDX41Q9UJV9 AL670379.10-201ENST00000604330 253 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 AL670379.9-201ENST00000605428 253 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 Y_RNA.812-201ENST00000610788 101 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 Y_RNA.784-201ENST00000613803 101 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 AC133104.2-201ENST00000615272 193 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 Y_RNA.787-201ENST00000616522 101 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 Y_RNA.780-201ENST00000617336 101 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 Y_RNA.801-201ENST00000619005 101 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 SNORD39.4-201ENST00000620099 78 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 AL359757.2-201ENST00000624309 274 ntBASIC4.75□□□□□ -1.65
DDX41Q9UJV9 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
DDX41Q9UJV9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.75□□□□□ -1.65
DDX41Q9UJV9 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
DDX41Q9UJV9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
DDX41Q9UJV9 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.75□□□□□ -1.65
DDX41Q9UJV9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 RNU6-601P-201ENST00000384540 107 ntBASIC4.74□□□□□ -1.65
DDX41Q9UJV9 RNU6-1025P-201ENST00000410629 104 ntBASIC4.74□□□□□ -1.65
DDX41Q9UJV9 RNU6-293P-201ENST00000411259 106 ntBASIC4.74□□□□□ -1.65
DDX41Q9UJV9 RNU6-607P-201ENST00000411283 108 ntBASIC4.74□□□□□ -1.65
DDX41Q9UJV9 AC108032.1-201ENST00000416706 207 ntBASIC4.74□□□□□ -1.65
DDX41Q9UJV9 AL353621.1-201ENST00000418219 243 ntBASIC4.74□□□□□ -1.65
DDX41Q9UJV9 AF228730.4-201ENST00000421457 183 ntBASIC4.74□□□□□ -1.65
DDX41Q9UJV9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 AL162151.2-201ENST00000448875 158 ntBASIC4.74□□□□□ -1.65
DDX41Q9UJV9 AC130509.1-201ENST00000464158 433 ntBASIC4.74□□□□□ -1.65
DDX41Q9UJV9 AC087884.1-201ENST00000469738 328 ntBASIC4.74□□□□□ -1.65
DDX41Q9UJV9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 AC017037.1-201ENST00000508460 471 ntBASIC4.74□□□□□ -1.65
DDX41Q9UJV9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 RNU2-58P-201ENST00000516403 183 ntBASIC4.74□□□□□ -1.65
DDX41Q9UJV9 RNU1-54P-201ENST00000517181 120 ntBASIC4.74□□□□□ -1.65
DDX41Q9UJV9 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 LRRC37A5P-203ENST00000580181 585 ntBASIC4.74□□□□□ -1.65
DDX41Q9UJV9 AC100830.2-201ENST00000581636 240 ntBASIC4.74□□□□□ -1.65
DDX41Q9UJV9 BNIP3P22-201ENST00000593399 556 ntBASIC4.74□□□□□ -1.65
DDX41Q9UJV9 AC004825.2-201ENST00000616634 455 ntBASIC4.74□□□□□ -1.65
DDX41Q9UJV9 AC008785.1-201ENST00000624475 456 ntBASIC4.74□□□□□ -1.65
DDX41Q9UJV9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 AC005183.1-201ENST00000603687 1979 ntBASIC4.74□□□□□ -1.65
DDX41Q9UJV9 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
DDX41Q9UJV9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
DDX41Q9UJV9 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
DDX41Q9UJV9 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
DDX41Q9UJV9 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
DDX41Q9UJV9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
DDX41Q9UJV9 RNU6-1303P-201ENST00000364841 107 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 AL359837.1-201ENST00000381357 287 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 RNU6-43P-201ENST00000384302 107 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 AL138878.1-201ENST00000405131 347 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 RPL21P65-201ENST00000406094 466 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 RNU4-14P-201ENST00000410858 122 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 CRYBB2P1-203ENST00000415709 538 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 RPS15AP6-201ENST00000420703 385 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 AL353729.1-201ENST00000425044 720 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 FABP5P15-201ENST00000453566 214 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 RN7SL585P-201ENST00000470538 280 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 KC877373.1-201ENST00000479066 408 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 AF213884.1-201ENST00000488102 463 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.73□□□□□ -1.65
DDX41Q9UJV9 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.73□□□□□ -1.65
DDX41Q9UJV9 RN7SKP13-201ENST00000515933 244 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 APOOP3-201ENST00000536787 586 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.73□□□□□ -1.65
DDX41Q9UJV9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.73□□□□□ -1.65
DDX41Q9UJV9 AC025423.5-201ENST00000550230 219 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 TRAV28-201ENST00000557548 323 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 AC006130.2-201ENST00000586202 326 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 CYP2C61P-201ENST00000604072 290 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 MIR92B-201ENST00000607575 96 ntBASIC4.73□□□□□ -1.65
DDX41Q9UJV9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
DDX41Q9UJV9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
DDX41Q9UJV9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms