Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 SNORD48-201ENST00000364953 64 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 CCDC58P2-201ENST00000417131 366 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.47□□□□□ -2.17
CCDC88CQ9P219 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC88CQ9P219 AL049734.2-201ENST00000441066 616 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 AC124916.1-201ENST00000444020 547 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 VN1R10P-201ENST00000447106 875 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC88CQ9P219 AC022447.3-201ENST00000506865 495 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.47□□□□□ -2.17
CCDC88CQ9P219 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 SLC2A13P1-201ENST00000531560 322 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 AC090502.2-201ENST00000549267 280 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.47□□□□□ -2.17
CCDC88CQ9P219 AC068620.3-201ENST00000602749 560 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 AC005776.1-201ENST00000603164 290 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.47□□□□□ -2.17
CCDC88CQ9P219 AC068944.2-201ENST00000610373 403 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 SNORA16.1-201ENST00000364597 132 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 RNU6-741P-201ENST00000383889 107 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 MIR217-201ENST00000384817 110 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 AP002784.2-201ENST00000397300 549 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.47□□□□□ -2.17
CCDC88CQ9P219 Z82210.1-201ENST00000440037 231 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 RPL26P6-201ENST00000440913 438 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 PIGFP3-201ENST00000441918 722 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.47□□□□□ -2.17
CCDC88CQ9P219 MTCYBP3-201ENST00000445588 1137 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.47□□□□□ -2.17
CCDC88CQ9P219 RPL31P41-201ENST00000477967 372 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.47□□□□□ -2.17
CCDC88CQ9P219 AC138853.1-201ENST00000503549 823 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 LRRC6P1-201ENST00000532188 885 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC88CQ9P219 HSPE1P3-201ENST00000559254 309 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 AC010546.1-201ENST00000569391 485 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.47□□□□□ -2.17
CCDC88CQ9P219 LARP7P2-201ENST00000575306 125 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC88CQ9P219 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.47□□□□□ -2.17
CCDC88CQ9P219 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.47□□□□□ -2.17
CCDC88CQ9P219 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.47□□□□□ -2.17
CCDC88CQ9P219 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.47□□□□□ -2.17
CCDC88CQ9P219 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
CCDC88CQ9P219 RNU6-492P-201ENST00000363035 104 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 RNU1-42P-201ENST00000364033 160 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 RNA5SP240-201ENST00000365355 128 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 RNU6-207P-201ENST00000384137 107 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 AL139098.1-201ENST00000407291 389 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 RNU2-68P-201ENST00000410878 191 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 AC023141.4-201ENST00000412031 328 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 AC007435.1-201ENST00000421086 415 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 AC009237.2-201ENST00000421358 284 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 ISCA1P6-201ENST00000427740 390 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 USP12PX-201ENST00000432383 1057 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 AL714022.1-201ENST00000439897 151 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 RNU7-140P-201ENST00000459546 60 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 RPS20P20-201ENST00000460498 340 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 AC116337.2-201ENST00000477662 156 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC88CQ9P219 MRPS17P9-201ENST00000511924 393 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.46□□□□□ -2.18
CCDC88CQ9P219 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC88CQ9P219 AC090821.2-201ENST00000523552 176 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.46□□□□□ -2.18
CCDC88CQ9P219 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.46□□□□□ -2.18
CCDC88CQ9P219 SNORD53B-201ENST00000577887 78 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CCDC88CQ9P219 AC107308.1-201ENST00000615897 301 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 AC073308.1-201ENST00000623696 305 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.46□□□□□ -2.18
CCDC88CQ9P219 AL356473.1-201ENST00000406203 1408 ntBASIC1.46□□□□□ -2.18
CCDC88CQ9P219 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
CCDC88CQ9P219 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.46□□□□□ -2.18
CCDC88CQ9P219 RNU6-707P-201ENST00000364647 95 ntBASIC1.45□□□□□ -2.18
CCDC88CQ9P219 RNU6-234P-201ENST00000365229 104 ntBASIC1.45□□□□□ -2.18
CCDC88CQ9P219 RNU6-53P-201ENST00000365367 106 ntBASIC1.45□□□□□ -2.18
CCDC88CQ9P219 SUGT1P1-201ENST00000379514 476 ntBASIC1.45□□□□□ -2.18
CCDC88CQ9P219 RPL7P27-201ENST00000403775 720 ntBASIC1.45□□□□□ -2.18
CCDC88CQ9P219 RAC1P8-201ENST00000427086 527 ntBASIC1.45□□□□□ -2.18
CCDC88CQ9P219 MTCYBP32-201ENST00000427945 1084 ntBASIC1.45□□□□□ -2.18
CCDC88CQ9P219 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC88CQ9P219 AC092427.1-201ENST00000439177 601 ntBASIC1.45□□□□□ -2.18
CCDC88CQ9P219 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC88CQ9P219 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.45□□□□□ -2.18
CCDC88CQ9P219 RPS15AP17-201ENST00000470598 390 ntBASIC1.45□□□□□ -2.18
CCDC88CQ9P219 RPS15AP36-201ENST00000492022 382 ntBASIC1.45□□□□□ -2.18
CCDC88CQ9P219 SNORA31.23-201ENST00000517219 133 ntBASIC1.45□□□□□ -2.18
CCDC88CQ9P219 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.45□□□□□ -2.18
CCDC88CQ9P219 AC087465.1-201ENST00000560574 245 ntBASIC1.45□□□□□ -2.18
CCDC88CQ9P219 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC88CQ9P219 MIR5708-201ENST00000579723 85 ntBASIC1.45□□□□□ -2.18
CCDC88CQ9P219 AL512506.1-201ENST00000613918 449 ntBASIC1.45□□□□□ -2.18
CCDC88CQ9P219 AC253576.2-201ENST00000618815 580 ntBASIC1.45□□□□□ -2.18
CCDC88CQ9P219 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.45□□□□□ -2.18
CCDC88CQ9P219 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
CCDC88CQ9P219 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
CCDC88CQ9P219 RNU6-560P-201ENST00000364007 108 ntBASIC1.45□□□□□ -2.18
CCDC88CQ9P219 RNU6-60P-201ENST00000364792 103 ntBASIC1.45□□□□□ -2.18
CCDC88CQ9P219 SNORD116-23-201ENST00000384645 92 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms