Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 RNU6-543P-201ENST00000362576 108 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 RNU5D-1-201ENST00000363299 116 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 RNU1-105P-201ENST00000363470 161 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 RNU6-339P-201ENST00000384310 107 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 RNU6-77P-201ENST00000410554 91 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 ZNF965P-201ENST00000432501 817 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AC104073.1-201ENST00000451988 151 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 snoU13.28-201ENST00000459235 104 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AC105252.1-201ENST00000503089 286 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AC124293.1-201ENST00000530034 493 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 CR383656.8-201ENST00000549046 145 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 EEF1B2P4-201ENST00000551398 348 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AC073968.1-201ENST00000618594 637 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AC008133.2-201ENST00000624540 351 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 DEFB108F-201ENST00000344638 222 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 MIR649-201ENST00000384843 97 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AL591212.2-201ENST00000433923 257 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AL596276.1-201ENST00000434465 418 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 RNF2P1-201ENST00000442955 1010 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 HMGN2P10-201ENST00000448085 265 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AL589880.1-201ENST00000448271 287 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AC104164.3-201ENST00000467363 1258 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 OR52A4P-202ENST00000481634 799 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AC025768.1-201ENST00000510057 267 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 MRPS17P9-201ENST00000511924 393 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 DEFB108D-201ENST00000527787 222 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 VN1R88P-201ENST00000596787 292 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AC008749.1-201ENST00000597650 306 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AL096840.1-201ENST00000603287 93 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 AC027309.3-201ENST00000623419 351 ntBASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
PHRF1Q9P1Y6 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.36□□□□□ -2.19
PHRF1Q9P1Y6 RNU6-374P-201ENST00000364146 108 ntBASIC1.36□□□□□ -2.19
PHRF1Q9P1Y6 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.36□□□□□ -2.19
PHRF1Q9P1Y6 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.36□□□□□ -2.19
PHRF1Q9P1Y6 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.36□□□□□ -2.19
PHRF1Q9P1Y6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.36□□□□□ -2.19
PHRF1Q9P1Y6 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
PHRF1Q9P1Y6 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.36□□□□□ -2.19
PHRF1Q9P1Y6 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.36□□□□□ -2.19
PHRF1Q9P1Y6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.36□□□□□ -2.19
PHRF1Q9P1Y6 AC084033.1-201ENST00000550830 633 ntBASIC1.36□□□□□ -2.19
PHRF1Q9P1Y6 SNORD114-21-201ENST00000606412 72 ntBASIC1.36□□□□□ -2.19
PHRF1Q9P1Y6 AC093838.1-201ENST00000613014 469 ntBASIC1.36□□□□□ -2.19
PHRF1Q9P1Y6 AC073569.3-201ENST00000619055 682 ntBASIC1.36□□□□□ -2.19
PHRF1Q9P1Y6 AC092608.3-201ENST00000625017 386 ntBASIC1.36□□□□□ -2.19
PHRF1Q9P1Y6 AL590396.2-201ENST00000636511 1041 ntBASIC1.36□□□□□ -2.19
PHRF1Q9P1Y6 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.36□□□□□ -2.19
PHRF1Q9P1Y6 RNU6-251P-201ENST00000363235 104 ntBASIC1.35□□□□□ -2.19
PHRF1Q9P1Y6 SNORA27.3-201ENST00000364937 134 ntBASIC1.35□□□□□ -2.19
PHRF1Q9P1Y6 SNORA51.6-201ENST00000384151 125 ntBASIC1.35□□□□□ -2.19
PHRF1Q9P1Y6 AL589655.1-201ENST00000405398 482 ntBASIC1.35□□□□□ -2.19
PHRF1Q9P1Y6 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
PHRF1Q9P1Y6 AC015724.1-201ENST00000478577 156 ntBASIC1.35□□□□□ -2.19
PHRF1Q9P1Y6 OR9N1P-202ENST00000494289 481 ntBASIC1.35□□□□□ -2.19
PHRF1Q9P1Y6 CBX3P3-201ENST00000508108 532 ntBASIC1.35□□□□□ -2.19
PHRF1Q9P1Y6 RNU6-1095P-201ENST00000516148 108 ntBASIC1.35□□□□□ -2.19
PHRF1Q9P1Y6 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.35□□□□□ -2.19
PHRF1Q9P1Y6 AC022880.1-201ENST00000534017 973 ntBASIC1.35□□□□□ -2.19
PHRF1Q9P1Y6 MIR3921-201ENST00000577308 85 ntBASIC1.35□□□□□ -2.19
PHRF1Q9P1Y6 MIR4658-201ENST00000584344 65 ntBASIC1.35□□□□□ -2.19
PHRF1Q9P1Y6 U73023.1-201ENST00000603134 700 ntBASIC1.35□□□□□ -2.19
PHRF1Q9P1Y6 AL020996.3-201ENST00000606617 222 ntBASIC1.35□□□□□ -2.19
PHRF1Q9P1Y6 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.35□□□□□ -2.19
PHRF1Q9P1Y6 AC016542.1-201ENST00000608259 493 ntBASIC1.35□□□□□ -2.19
PHRF1Q9P1Y6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
PHRF1Q9P1Y6 AL022578.1-201ENST00000439330 1433 ntBASIC1.35□□□□□ -2.19
PHRF1Q9P1Y6 RNU6-989P-201ENST00000362756 107 ntBASIC1.34□□□□□ -2.19
PHRF1Q9P1Y6 SNORA68.1-201ENST00000364537 132 ntBASIC1.34□□□□□ -2.19
PHRF1Q9P1Y6 RNU4-42P-201ENST00000364738 142 ntBASIC1.34□□□□□ -2.19
PHRF1Q9P1Y6 ZNF736P10Y-201ENST00000403990 1110 ntBASIC1.34□□□□□ -2.19
PHRF1Q9P1Y6 AL356320.2-201ENST00000417263 507 ntBASIC1.34□□□□□ -2.19
PHRF1Q9P1Y6 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.34□□□□□ -2.19
PHRF1Q9P1Y6 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.34□□□□□ -2.19
PHRF1Q9P1Y6 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.34□□□□□ -2.19
PHRF1Q9P1Y6 AL359385.1-201ENST00000456509 365 ntBASIC1.34□□□□□ -2.19
PHRF1Q9P1Y6 RPL31P58-201ENST00000469001 379 ntBASIC1.34□□□□□ -2.19
PHRF1Q9P1Y6 RPS23P4-201ENST00000487908 423 ntBASIC1.34□□□□□ -2.19
PHRF1Q9P1Y6 AC008127.2-201ENST00000549925 1075 ntBASIC1.34□□□□□ -2.19
PHRF1Q9P1Y6 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.34□□□□□ -2.19
PHRF1Q9P1Y6 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms