Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 RNU6-1282P-201ENST00000516735 96 ntBASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 RNU6-273P-201ENST00000516937 96 ntBASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 RNU1-45P-201ENST00000517191 141 ntBASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 AP003730.1-201ENST00000524605 285 ntBASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 MIR4795-201ENST00000584182 89 ntBASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 MIR5692C1-201ENST00000585309 91 ntBASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 AC024220.1-201ENST00000603675 484 ntBASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 AC136601.2-201ENST00000604356 474 ntBASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 MIR3653-201ENST00000625572 110 ntBASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 LINC02471-203ENST00000641941 4752 ntBASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 FAM35BP-202ENST00000497389 3337 ntBASIC3.92□□□□□ -1.78
CCM2LQ9NUG4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 RNU6-128P-201ENST00000383976 107 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 MIR450B-201ENST00000401182 78 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 RNU6-607P-201ENST00000411283 108 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 VN1R36P-201ENST00000414936 291 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 AC092047.1-201ENST00000424997 240 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 AC005019.1-201ENST00000436455 431 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 AC117503.1-201ENST00000472241 394 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 AC022493.1-201ENST00000492984 337 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 MTND3P25-201ENST00000509243 135 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 RPL39P5-202ENST00000512505 151 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 RNU6-277P-201ENST00000516272 106 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 RNA5SP165-201ENST00000517142 115 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 AC087369.1-201ENST00000520775 996 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 GLYCAM1-201ENST00000546596 285 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 AL355375.2-201ENST00000574825 175 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 AC023043.2-201ENST00000589678 1026 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 AC002044.1-201ENST00000606707 158 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 RMST_4.1-201ENST00000616886 107 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 AL031601.2-202ENST00000622650 282 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 AL133216.2-202ENST00000634512 349 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 MIR492-201ENST00000638676 116 ntBASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCM2LQ9NUG4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCM2LQ9NUG4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCM2LQ9NUG4 AC118273.1-201ENST00000525324 3006 ntBASIC3.9□□□□□ -1.78
CCM2LQ9NUG4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.9□□□□□ -1.78
CCM2LQ9NUG4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCM2LQ9NUG4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 Y_RNA.212-201ENST00000364177 102 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 RNA5SP387-201ENST00000364226 106 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 RNU6-1303P-201ENST00000364841 107 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 RNA5SP44-201ENST00000410446 133 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 SNRPEP9-201ENST00000436794 238 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 RN7SL98P-201ENST00000462271 300 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 RN7SL93P-201ENST00000463035 293 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 RPL7P43-201ENST00000478876 753 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 RNA5SP73-201ENST00000516744 108 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 AC087854.1-201ENST00000519706 414 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 RNU6-323P-201ENST00000521915 107 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 CASP1P1-201ENST00000526345 212 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 AC093027.1-201ENST00000546698 429 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 GNRHR2P1-201ENST00000555315 631 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 MIR4444-1-201ENST00000581696 74 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 MIR4444-2-201ENST00000584390 74 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 AC113139.1-201ENST00000605049 239 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 FAM157A-202ENST00000615155 405 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 AC099506.2-201ENST00000623074 221 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 AC005183.1-201ENST00000603687 1979 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 NCAPGP1-201ENST00000505112 1814 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 IPO8P1-201ENST00000455509 3109 ntBASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.9□□□□□ -1.79
CCM2LQ9NUG4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCM2LQ9NUG4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCM2LQ9NUG4 CUL1P1-201ENST00000509510 2425 ntBASIC3.89□□□□□ -1.79
CCM2LQ9NUG4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms