Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.16□□□□□ -1.9
ECHDC1Q9NTX5 AC068792.1-201ENST00000621354 417 ntBASIC3.16□□□□□ -1.9
ECHDC1Q9NTX5 AC019226.1-201ENST00000625666 515 ntBASIC3.16□□□□□ -1.9
ECHDC1Q9NTX5 OR5AK4P-201ENST00000635912 903 ntBASIC3.16□□□□□ -1.9
ECHDC1Q9NTX5 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.16□□□□□ -1.9
ECHDC1Q9NTX5 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ECHDC1Q9NTX5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.16□□□□□ -1.9
ECHDC1Q9NTX5 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.16□□□□□ -1.9
ECHDC1Q9NTX5 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ECHDC1Q9NTX5 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
ECHDC1Q9NTX5 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.9
ECHDC1Q9NTX5 AC138915.3-201ENST00000562908 1389 ntBASIC3.15□□□□□ -1.9
ECHDC1Q9NTX5 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
ECHDC1Q9NTX5 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 RNU5A-8P-201ENST00000364102 114 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 RNU6-169P-201ENST00000365336 107 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 RNU6-637P-201ENST00000384050 107 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 AL139039.1-201ENST00000401900 692 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 MIR1289-1-201ENST00000408836 144 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 RNU2-43P-201ENST00000410306 190 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 RNU6-516P-201ENST00000411381 104 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 AC127391.1-201ENST00000411737 98 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 MTCO3P12-201ENST00000416718 547 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 PPP1R11P2-201ENST00000423543 382 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 AC004866.2-201ENST00000438285 481 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 RPS15AP9-201ENST00000439856 381 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 RPL26P6-201ENST00000440913 438 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 MTATP6P30-201ENST00000443540 664 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 SSXP4-201ENST00000451349 245 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 RPL9P6-201ENST00000492764 598 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 RNA5SP385-201ENST00000515947 110 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 RNU6-64P-201ENST00000517119 105 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 MIR4298-201ENST00000584380 73 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 AC025165.5-201ENST00000602802 578 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 AL133173.2-201ENST00000614270 90 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 AL360181.4-201ENST00000621752 134 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 AC138649.3-201ENST00000622154 254 ntBASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.91
ECHDC1Q9NTX5 AC009812.4-201ENST00000569134 1805 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 RNU6-39P-201ENST00000384344 107 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 MIR592-201ENST00000384959 97 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 RNU6-754P-201ENST00000391166 107 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 UBE2FP1-201ENST00000416536 447 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 MTND1P4-201ENST00000435196 415 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 RNA5SP468-201ENST00000516782 93 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 MTCYBP20-201ENST00000524239 1129 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 ELOCP31-201ENST00000540463 467 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 ARL2BPP2-201ENST00000550907 489 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 AC005951.2-201ENST00000576282 495 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 FAM60BP-201ENST00000578364 658 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 KC877982.1-201ENST00000602313 470 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 AC103710.1-201ENST00000610003 901 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 AC099778.2-201ENST00000610904 211 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 AL110115.1-201ENST00000614396 364 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 uc_338.12-201ENST00000616344 181 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 AL359740.1-201ENST00000624340 592 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 AC092608.2-201ENST00000624427 218 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 AC099654.12-201ENST00000639868 649 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 MTCO1P9-201ENST00000505577 1534 ntBASIC3.14□□□□□ -1.91
ECHDC1Q9NTX5 AC091152.2-201ENST00000591628 2569 ntBASIC3.13□□□□□ -1.91
ECHDC1Q9NTX5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
ECHDC1Q9NTX5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.13□□□□□ -1.91
ECHDC1Q9NTX5 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ECHDC1Q9NTX5 DYNLT3P1-201ENST00000378574 347 ntBASIC3.13□□□□□ -1.91
ECHDC1Q9NTX5 RNU6-517P-201ENST00000384362 110 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms