Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC005297.2-201ENST00000450430 606 ntBASIC1.6□□□□□ -2.15
CISHQ9NSE2 OFD1P3Y-201ENST00000453312 783 ntBASIC1.6□□□□□ -2.15
CISHQ9NSE2 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.6□□□□□ -2.15
CISHQ9NSE2 MTCO1P42-201ENST00000457379 726 ntBASIC1.6□□□□□ -2.15
CISHQ9NSE2 RPS15AP17-201ENST00000470598 390 ntBASIC1.6□□□□□ -2.15
CISHQ9NSE2 BZW1P2-201ENST00000473537 826 ntBASIC1.6□□□□□ -2.15
CISHQ9NSE2 RPL23AP41-201ENST00000484754 458 ntBASIC1.6□□□□□ -2.15
CISHQ9NSE2 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.6□□□□□ -2.15
CISHQ9NSE2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CISHQ9NSE2 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.6□□□□□ -2.15
CISHQ9NSE2 RNU6-1102P-201ENST00000516149 96 ntBASIC1.6□□□□□ -2.15
CISHQ9NSE2 RN7SKP31-201ENST00000516354 278 ntBASIC1.6□□□□□ -2.15
CISHQ9NSE2 RNU6-528P-201ENST00000516926 100 ntBASIC1.6□□□□□ -2.15
CISHQ9NSE2 AC118273.2-201ENST00000532092 465 ntBASIC1.6□□□□□ -2.15
CISHQ9NSE2 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.6□□□□□ -2.15
CISHQ9NSE2 MIR4303-201ENST00000581299 66 ntBASIC1.6□□□□□ -2.15
CISHQ9NSE2 MIR4524B-201ENST00000581569 115 ntBASIC1.6□□□□□ -2.15
CISHQ9NSE2 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.6□□□□□ -2.15
CISHQ9NSE2 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.6□□□□□ -2.15
CISHQ9NSE2 AC007349.4-201ENST00000608114 532 ntBASIC1.6□□□□□ -2.15
CISHQ9NSE2 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.6□□□□□ -2.15
CISHQ9NSE2 AL353997.5-201ENST00000618886 171 ntBASIC1.6□□□□□ -2.15
CISHQ9NSE2 AC008443.7-201ENST00000622195 246 ntBASIC1.6□□□□□ -2.15
CISHQ9NSE2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
CISHQ9NSE2 RNA5SP99-201ENST00000364020 114 ntBASIC1.59□□□□□ -2.15
CISHQ9NSE2 MIR320A-201ENST00000385302 82 ntBASIC1.59□□□□□ -2.15
CISHQ9NSE2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CISHQ9NSE2 LUZP4P1-201ENST00000415420 344 ntBASIC1.59□□□□□ -2.15
CISHQ9NSE2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.59□□□□□ -2.15
CISHQ9NSE2 SNORD121B-201ENST00000458838 81 ntBASIC1.59□□□□□ -2.15
CISHQ9NSE2 RPS20P20-201ENST00000460498 340 ntBASIC1.59□□□□□ -2.15
CISHQ9NSE2 RNU2-44P-201ENST00000516795 194 ntBASIC1.59□□□□□ -2.15
CISHQ9NSE2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.59□□□□□ -2.15
CISHQ9NSE2 CBX3P7-201ENST00000532876 502 ntBASIC1.59□□□□□ -2.15
CISHQ9NSE2 AL359212.1-201ENST00000556608 614 ntBASIC1.59□□□□□ -2.15
CISHQ9NSE2 AC015720.1-201ENST00000565251 277 ntBASIC1.59□□□□□ -2.15
CISHQ9NSE2 MIR4529-201ENST00000578110 78 ntBASIC1.59□□□□□ -2.15
CISHQ9NSE2 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.59□□□□□ -2.15
CISHQ9NSE2 AP000403.1-201ENST00000603349 851 ntBASIC1.59□□□□□ -2.15
CISHQ9NSE2 AC100814.1-201ENST00000606963 623 ntBASIC1.59□□□□□ -2.15
CISHQ9NSE2 U4atac.1-201ENST00000618345 95 ntBASIC1.59□□□□□ -2.15
CISHQ9NSE2 AP002791.1-201ENST00000623291 381 ntBASIC1.59□□□□□ -2.15
CISHQ9NSE2 MTND1P37-201ENST00000636562 264 ntBASIC1.59□□□□□ -2.15
CISHQ9NSE2 AC087821.2-201ENST00000637086 450 ntBASIC1.59□□□□□ -2.15
CISHQ9NSE2 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.59□□□□□ -2.16
CISHQ9NSE2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CISHQ9NSE2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CISHQ9NSE2 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CISHQ9NSE2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CISHQ9NSE2 RNU4-13P-201ENST00000364019 141 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 SNRPEP2-201ENST00000397592 279 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.58□□□□□ -2.16
CISHQ9NSE2 AIMP1P2-201ENST00000425294 312 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 AL354695.1-201ENST00000427935 228 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 AL353689.1-201ENST00000438895 199 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 SEPT14P24-201ENST00000447236 180 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 AL500527.1-201ENST00000448532 255 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.58□□□□□ -2.16
CISHQ9NSE2 RPL21P134-201ENST00000453468 483 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 RPL23AP3-201ENST00000453844 468 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.58□□□□□ -2.16
CISHQ9NSE2 AC023790.1-201ENST00000482174 347 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 AC107032.1-201ENST00000485945 480 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CISHQ9NSE2 HMGB3P17-201ENST00000504195 649 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 LTV1P1-201ENST00000510683 1237 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.58□□□□□ -2.16
CISHQ9NSE2 SNORA31.24-201ENST00000517232 57 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 AC006518.2-201ENST00000542513 940 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 MTATP6P25-201ENST00000574491 261 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 MIR4789-201ENST00000577469 82 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 MIR4637-201ENST00000582405 84 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 AP001542.2-201ENST00000593141 364 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 AC011451.2-201ENST00000604303 598 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 AC069294.1-201ENST00000608397 350 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CISHQ9NSE2 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
CISHQ9NSE2 AC103710.2-202ENST00000641454 2853 ntBASIC1.58□□□□□ -2.16
CISHQ9NSE2 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CISHQ9NSE2 AC010889.1-201ENST00000566193 2666 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 AC008555.8-201ENST00000623602 2168 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 RNU6-884P-201ENST00000363889 107 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 U8.14-201ENST00000390843 143 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 RNU6-1300P-201ENST00000391046 108 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 TPMTP3-201ENST00000411928 735 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 RPS3AP44-201ENST00000425466 790 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 RPL30P4-201ENST00000429309 333 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 ZYG11AP1-201ENST00000430329 837 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 MED14P1-201ENST00000430517 648 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 AC098831.1-201ENST00000440661 216 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 RPL39P6-201ENST00000448289 150 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 COX6CP18-201ENST00000448769 222 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.57□□□□□ -2.16
CISHQ9NSE2 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.57□□□□□ -2.16
CISHQ9NSE2 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.57□□□□□ -2.16
CISHQ9NSE2 Y_RNA.675-201ENST00000516389 149 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 SNORA48.9-201ENST00000516419 162 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 ZNF971P-201ENST00000562068 1249 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 LINC00557-201ENST00000563184 1279 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 232.8 ms