Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 MIR181A1-201ENST00000385026 110 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 MIR1290-201ENST00000408735 78 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 FCF1P9-201ENST00000412546 282 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.42□□□□□ -1.86
DDX4Q9NQI0 AC007283.2-201ENST00000424739 197 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 ISCA1P1-201ENST00000426679 387 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.42□□□□□ -1.86
DDX4Q9NQI0 FCF1P1-201ENST00000432690 571 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 AC087499.2-201ENST00000432861 149 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 GPR143P-201ENST00000434155 205 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 RPL26P6-201ENST00000440913 438 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 AC079781.2-201ENST00000446424 169 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 AC132479.1-201ENST00000449160 144 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 PSPHP1-201ENST00000450062 261 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 NIPA2P5-201ENST00000452282 464 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.42□□□□□ -1.86
DDX4Q9NQI0 AC022364.2-201ENST00000457963 554 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 AC126182.1-201ENST00000478134 357 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 RN7SL432P-201ENST00000484057 298 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 AC007182.2-201ENST00000489251 402 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.42□□□□□ -1.86
DDX4Q9NQI0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.42□□□□□ -1.86
DDX4Q9NQI0 AC010265.1-201ENST00000513509 211 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 RNU7-51P-201ENST00000516560 62 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 RNU6-410P-201ENST00000517006 107 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 SNORA31.22-201ENST00000517204 135 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
DDX4Q9NQI0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.42□□□□□ -1.86
DDX4Q9NQI0 AC093012.1-202ENST00000549403 582 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 AC136619.2-201ENST00000563361 631 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 RPL23AP84-201ENST00000571193 464 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.42□□□□□ -1.86
DDX4Q9NQI0 MIR3921-201ENST00000577308 85 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.42□□□□□ -1.86
DDX4Q9NQI0 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 AL158209.2-201ENST00000619266 216 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 AL136313.1-201ENST00000624804 202 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
DDX4Q9NQI0 CR848007.1-201ENST00000442354 1699 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
DDX4Q9NQI0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
DDX4Q9NQI0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
DDX4Q9NQI0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
DDX4Q9NQI0 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
DDX4Q9NQI0 RNU6-181P-201ENST00000363225 107 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 SNORD56.2-201ENST00000363242 71 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 U3.6-201ENST00000363622 211 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 RNU6-169P-201ENST00000365336 107 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
DDX4Q9NQI0 RNU4-55P-201ENST00000410731 137 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX4Q9NQI0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.41□□□□□ -1.86
DDX4Q9NQI0 HSPE1P1-201ENST00000421494 318 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 RPL27AP8-201ENST00000424277 446 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 DPPA2P1-201ENST00000428060 556 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 MTCO2P11-201ENST00000431069 680 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC079382.1-201ENST00000493346 557 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC114797.1-201ENST00000514003 728 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 SNORA31.8-201ENST00000516327 108 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 RNU6-445P-201ENST00000516949 107 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC093331.1-201ENST00000521474 169 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.41□□□□□ -1.86
DDX4Q9NQI0 FAM60DP-201ENST00000524174 632 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.41□□□□□ -1.86
DDX4Q9NQI0 OR4H12P-201ENST00000556269 907 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 MED28P6-201ENST00000558776 231 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.41□□□□□ -1.86
DDX4Q9NQI0 NRBF2P5-201ENST00000603087 788 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AL670379.6-201ENST00000603753 252 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AL670379.11-201ENST00000604059 253 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC008162.1-201ENST00000604718 254 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AL670379.1-201ENST00000604752 252 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AL670379.5-201ENST00000605253 252 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AL670379.12-201ENST00000605291 253 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AL670379.8-201ENST00000605353 252 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AL670379.7-201ENST00000605823 252 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 SDR42E1P2-201ENST00000614861 481 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC124864.2-201ENST00000624736 186 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC068137.3-201ENST00000639191 341 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 AC073869.6-201ENST00000640656 341 ntBASIC3.41□□□□□ -1.86
DDX4Q9NQI0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.41□□□□□ -1.86
DDX4Q9NQI0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.4□□□□□ -1.86
DDX4Q9NQI0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
DDX4Q9NQI0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
DDX4Q9NQI0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
DDX4Q9NQI0 RNU5A-1-201ENST00000362698 116 ntBASIC3.4□□□□□ -1.87
DDX4Q9NQI0 RNU1-112P-201ENST00000364401 164 ntBASIC3.4□□□□□ -1.87
DDX4Q9NQI0 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
DDX4Q9NQI0 RNU6-517P-201ENST00000384362 110 ntBASIC3.4□□□□□ -1.87
DDX4Q9NQI0 AL359634.1-202ENST00000404721 284 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms