Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 RNA5SP196-201ENST00000625967 102 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 SEPT14P19-203ENST00000633205 211 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 AC099654.12-201ENST00000639868 649 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 AC008264.2-201ENST00000610193 3731 ntBASIC2.92□□□□□ -1.94
CHMP1AQ9HD42 HSPA8P4-201ENST00000511877 1920 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 MTND4P35-201ENST00000604257 1375 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 NACAP2-201ENST00000318548 624 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 OR4G2P-201ENST00000328113 903 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 CALM2P3-201ENST00000400429 449 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AC023141.4-201ENST00000412031 328 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 EEF1A1P40-201ENST00000412883 573 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AC063979.1-201ENST00000415539 377 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AL356968.1-201ENST00000416622 474 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 CALM2P2-201ENST00000428512 440 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 MYL8P-204ENST00000431574 518 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AC007389.2-201ENST00000434630 306 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 RPL21P133-201ENST00000443666 476 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AL118520.1-201ENST00000450770 291 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AL356010.1-201ENST00000456364 102 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 RPS26P21-201ENST00000475397 348 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AC082651.2-201ENST00000496833 166 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AC092436.1-201ENST00000506450 503 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AC114786.4-201ENST00000508771 728 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AC025755.1-201ENST00000521306 278 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 RANP3-201ENST00000530970 276 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AC007224.1-201ENST00000564410 144 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 MIR4700-201ENST00000578311 74 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AC008752.3-201ENST00000588113 712 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AC078899.3-201ENST00000599065 212 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 DEFB131E-202ENST00000602581 683 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AL670379.4-201ENST00000605279 254 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AC008536.2-201ENST00000607284 349 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AC024940.5-201ENST00000622889 474 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 U6.114-201ENST00000636407 96 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 ELF2P3-201ENST00000445099 1506 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 AC091564.4-201ENST00000533934 2194 ntBASIC2.91□□□□□ -1.94
CHMP1AQ9HD42 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CHMP1AQ9HD42 MFSD8-233ENST00000641482 4860 ntBASIC2.9□□□□□ -1.94
CHMP1AQ9HD42 AC032011.1-201ENST00000611703 1549 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 SNORD9-201ENST00000362566 104 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 SNORA70.2-201ENST00000364506 135 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 RNU6-550P-201ENST00000391057 101 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 RNU6-1158P-201ENST00000391167 107 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 MTCO3P40-201ENST00000392516 676 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 AL591416.1-201ENST00000404015 867 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 RNU6-1025P-201ENST00000410629 104 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 RPL26P27-201ENST00000414397 437 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 BMS1P22-201ENST00000414726 313 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 OR6C66P-201ENST00000414917 930 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 BPY2DP-201ENST00000422208 265 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 RSL24D1P6-201ENST00000426934 401 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 AC244505.4-201ENST00000434905 287 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 SSXP5-201ENST00000443473 287 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 WASF1P1-201ENST00000447560 1131 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 AC022493.1-201ENST00000492984 337 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 SNORA70.18-201ENST00000516696 98 ntBASIC2.9□□□□□ -1.95
CHMP1AQ9HD42 RNA5SP503-201ENST00000517047 117 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms