Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 MIR3660-201ENST00000584845 100 ntBASIC1.28□□□□□ -2.2
KIAA1549Q9HCM3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.28□□□□□ -2.2
KIAA1549Q9HCM3 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.28□□□□□ -2.2
KIAA1549Q9HCM3 FTX_3.1-201ENST00000610451 147 ntBASIC1.28□□□□□ -2.2
KIAA1549Q9HCM3 MIR7974-201ENST00000615835 79 ntBASIC1.28□□□□□ -2.2
KIAA1549Q9HCM3 AC068057.2-201ENST00000624047 895 ntBASIC1.28□□□□□ -2.2
KIAA1549Q9HCM3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
KIAA1549Q9HCM3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.21
KIAA1549Q9HCM3 AL391987.6-201ENST00000305671 199 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 RNU5A-1-201ENST00000362698 116 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 AC096649.2-201ENST00000416186 393 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 AL513185.2-201ENST00000425543 193 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 AC241584.1-201ENST00000438469 1241 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 SUMO2P2-201ENST00000456482 255 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 MTCO1P42-201ENST00000457379 726 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 RPL21P47-201ENST00000483696 477 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 AC008526.1-201ENST00000509149 338 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 AP001269.3-201ENST00000588718 329 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 AP002906.1-201ENST00000603405 233 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 AC080078.3-201ENST00000605407 463 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 LINC02211-204ENST00000642024 1070 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 ZNF209P-201ENST00000593450 2304 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 MIR16-1-201ENST00000385271 89 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 RPL26P6-201ENST00000440913 438 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 USP9YP34-201ENST00000453983 808 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 BZW1P2-201ENST00000473537 826 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 LTV1P1-201ENST00000510683 1237 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 RNU1-92P-201ENST00000517017 135 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 AP005435.4-201ENST00000529514 284 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 HSPE1P3-201ENST00000559254 309 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 AP003973.1-201ENST00000604639 691 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 AC016911.1-201ENST00000613297 452 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 AL353770.2-201ENST00000620024 78 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 AC098657.3-201ENST00000620434 263 ntBASIC1.27□□□□□ -2.21
KIAA1549Q9HCM3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 AL359854.1-201ENST00000614203 1594 ntBASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 MIR320A-201ENST00000385302 82 ntBASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 TXNP7-201ENST00000406296 293 ntBASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 AL139098.1-201ENST00000407291 389 ntBASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 RNU4-27P-201ENST00000410889 139 ntBASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 AL590383.1-201ENST00000428602 75 ntBASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 RPS15AP5-201ENST00000436276 388 ntBASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 AC007000.2-201ENST00000442564 487 ntBASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 SULT1C2P1-202ENST00000562418 459 ntBASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 AC093519.1-201ENST00000566109 298 ntBASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 AL022067.1-201ENST00000602426 454 ntBASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 AL592148.2-201ENST00000612210 372 ntBASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.26□□□□□ -2.21
KIAA1549Q9HCM3 AC004520.1-201ENST00000608362 1413 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 MIR96-201ENST00000362288 78 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 VN1R36P-201ENST00000414936 291 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 HMGB1P49-201ENST00000418882 569 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 PSMA6P3-201ENST00000428242 164 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 MTND2P5-201ENST00000432656 1006 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 RPL12P25-201ENST00000455592 494 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 MTCYBP18-201ENST00000501056 747 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 HMGB3P17-201ENST00000504195 649 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AF213884.2-201ENST00000510417 903 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 SNORA31.24-201ENST00000517232 57 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AP003033.1-201ENST00000527244 415 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AL133241.1-201ENST00000556832 487 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 MIR3199-1-201ENST00000582434 88 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AP001033.2-201ENST00000609701 1003 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AL512598.1-201ENST00000610158 273 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AC090132.2-201ENST00000615881 347 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AC006338.1-201ENST00000618453 749 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms