Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 AL161756.2-201ENST00000604597 246 ntBASIC2.54□□□□□ -2
ELL3Q9HB65 AL121992.2-201ENST00000606262 256 ntBASIC2.54□□□□□ -2
ELL3Q9HB65 AC245008.1-201ENST00000608123 476 ntBASIC2.54□□□□□ -2
ELL3Q9HB65 AC006566.1-201ENST00000608943 513 ntBASIC2.54□□□□□ -2
ELL3Q9HB65 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.54□□□□□ -2
ELL3Q9HB65 AC130324.3-201ENST00000614165 542 ntBASIC2.54□□□□□ -2
ELL3Q9HB65 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
ELL3Q9HB65 AC002064.3-201ENST00000623448 346 ntBASIC2.54□□□□□ -2
ELL3Q9HB65 MIR6733-201ENST00000635723 61 ntBASIC2.54□□□□□ -2
ELL3Q9HB65 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.54□□□□□ -2
ELL3Q9HB65 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.54□□□□□ -2
ELL3Q9HB65 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.54□□□□□ -2
ELL3Q9HB65 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.53□□□□□ -2
ELL3Q9HB65 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.53□□□□□ -2
ELL3Q9HB65 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.53□□□□□ -2
ELL3Q9HB65 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.53□□□□□ -2
ELL3Q9HB65 AC073325.2-201ENST00000339545 159 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 RNU6-884P-201ENST00000363889 107 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 Y_RNA.201-201ENST00000364052 96 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 RNU4-40P-201ENST00000364351 143 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 SNORA20.2-201ENST00000383922 131 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 MIR1289-1-201ENST00000408836 144 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 MTND3P17-201ENST00000416968 344 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 SKA2P1-201ENST00000425592 390 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 AL365496.1-201ENST00000426885 215 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.53□□□□□ -2
ELL3Q9HB65 RPS15AP9-201ENST00000439856 381 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 RPL23AP58-201ENST00000440453 469 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 WASF1P1-201ENST00000447560 1131 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 AC079448.1-201ENST00000449377 373 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 SNRPFP4-201ENST00000456366 242 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 MTCO2P29-201ENST00000465212 189 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.53□□□□□ -2
ELL3Q9HB65 SUMO2P6-201ENST00000505273 288 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 AC026427.2-201ENST00000506228 536 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 RNA5SP341-201ENST00000516261 117 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 RNA5SP290-201ENST00000517133 127 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.53□□□□□ -2
ELL3Q9HB65 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.53□□□□□ -2
ELL3Q9HB65 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.53□□□□□ -2
ELL3Q9HB65 AP002453.2-201ENST00000533503 320 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.53□□□□□ -2
ELL3Q9HB65 AL391261.3-201ENST00000557194 520 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 HMGB1P14-201ENST00000557424 591 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.53□□□□□ -2
ELL3Q9HB65 HMGN2P15-201ENST00000585707 270 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 AL161729.4-201ENST00000604650 476 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 AC004908.3-201ENST00000610248 625 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.53□□□□□ -2
ELL3Q9HB65 MIR8057-201ENST00000620957 69 ntBASIC2.53□□□□□ -2
ELL3Q9HB65 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.53□□□□□ -2
ELL3Q9HB65 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
ELL3Q9HB65 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.53□□□□□ -2
ELL3Q9HB65 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.53□□□□□ -2
ELL3Q9HB65 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
ELL3Q9HB65 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
ELL3Q9HB65 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
ELL3Q9HB65 AC233263.6-201ENST00000631132 1963 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ELL3Q9HB65 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ELL3Q9HB65 FARSBP1-201ENST00000435808 1778 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
ELL3Q9HB65 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 Y_RNA.245-201ENST00000364493 95 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
ELL3Q9HB65 RNU6-1027P-201ENST00000383998 107 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.52□□□□□ -2.01
ELL3Q9HB65 AC023141.4-201ENST00000412031 328 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 BTF3L4P1-201ENST00000413813 468 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 CDK8P2-201ENST00000415020 547 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 AL451074.5-201ENST00000415894 435 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 C1DP2-201ENST00000418167 426 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.52□□□□□ -2.01
ELL3Q9HB65 ISCA1P1-201ENST00000426679 387 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 ZNF863P-201ENST00000426746 417 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 AL592045.1-201ENST00000429867 352 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 RPL23AP30-201ENST00000432419 501 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 MTATP6P16-201ENST00000434543 526 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.52□□□□□ -2.01
ELL3Q9HB65 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.52□□□□□ -2.01
ELL3Q9HB65 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.52□□□□□ -2.01
ELL3Q9HB65 RN7SL432P-201ENST00000484057 298 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.52□□□□□ -2.01
ELL3Q9HB65 AC007182.2-201ENST00000489251 402 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.52□□□□□ -2.01
ELL3Q9HB65 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ELL3Q9HB65 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.52□□□□□ -2.01
ELL3Q9HB65 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ELL3Q9HB65 AP002963.1-201ENST00000530590 184 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ELL3Q9HB65 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.52□□□□□ -2.01
ELL3Q9HB65 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.52□□□□□ -2.01
ELL3Q9HB65 AC012213.3-201ENST00000577199 777 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 BNIP3P22-201ENST00000593399 556 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.52□□□□□ -2.01
ELL3Q9HB65 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.52□□□□□ -2.01
ELL3Q9HB65 AC097065.2-201ENST00000608159 533 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.52□□□□□ -2.01
ELL3Q9HB65 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms