Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 AC140479.2-201ENST00000421567 3130 ntBASIC6.83□□□□□ -1.32
RNF39Q9H2S5 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 PRNCR1-201ENST00000635449 12727 ntBASIC6.82□□□□□ -1.32
RNF39Q9H2S5 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 AC062029.1-202ENST00000606164 3651 ntBASIC6.82□□□□□ -1.32
RNF39Q9H2S5 AL359195.2-201ENST00000623657 4412 ntBASIC6.82□□□□□ -1.32
RNF39Q9H2S5 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 RNU1-24P-201ENST00000364285 165 ntBASIC6.82□□□□□ -1.32
RNF39Q9H2S5 RNU6-686P-201ENST00000364839 107 ntBASIC6.82□□□□□ -1.32
RNF39Q9H2S5 SNORA51.8-201ENST00000384234 132 ntBASIC6.82□□□□□ -1.32
RNF39Q9H2S5 MIR130B-202ENST00000385018 82 ntBASIC6.82□□□□□ -1.32
RNF39Q9H2S5 AP000567.1-201ENST00000406413 156 ntBASIC6.82□□□□□ -1.32
RNF39Q9H2S5 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 RNA5SP230-201ENST00000517039 122 ntBASIC6.82□□□□□ -1.32
RNF39Q9H2S5 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 AL121603.1-201ENST00000553815 142 ntBASIC6.82□□□□□ -1.32
RNF39Q9H2S5 MIR3921-201ENST00000577308 85 ntBASIC6.82□□□□□ -1.32
RNF39Q9H2S5 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.82□□□□□ -1.32
RNF39Q9H2S5 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
RNF39Q9H2S5 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF39Q9H2S5 NOL8P1-201ENST00000508336 3529 ntBASIC6.81□□□□□ -1.32
RNF39Q9H2S5 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.81□□□□□ -1.32
RNF39Q9H2S5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC6.81□□□□□ -1.32
RNF39Q9H2S5 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RNF39Q9H2S5 Y_RNA.37-201ENST00000362606 108 ntBASIC6.81□□□□□ -1.32
RNF39Q9H2S5 RNU6-743P-201ENST00000364151 106 ntBASIC6.81□□□□□ -1.32
RNF39Q9H2S5 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
RNF39Q9H2S5 AC090844.1-201ENST00000422019 156 ntBASIC6.81□□□□□ -1.32
RNF39Q9H2S5 AC009963.3-201ENST00000458090 486 ntBASIC6.81□□□□□ -1.32
RNF39Q9H2S5 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.81□□□□□ -1.32
RNF39Q9H2S5 RNU7-153P-201ENST00000516455 62 ntBASIC6.81□□□□□ -1.32
RNF39Q9H2S5 RNU6-557P-201ENST00000516842 110 ntBASIC6.81□□□□□ -1.32
RNF39Q9H2S5 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF39Q9H2S5 MIR5095-201ENST00000578844 88 ntBASIC6.81□□□□□ -1.32
RNF39Q9H2S5 AC097467.4-201ENST00000605504 141 ntBASIC6.81□□□□□ -1.32
RNF39Q9H2S5 AC092266.1-201ENST00000610958 165 ntBASIC6.81□□□□□ -1.32
RNF39Q9H2S5 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RNF39Q9H2S5 OR52B5P-204ENST00000641744 3467 ntBASIC6.81□□□□□ -1.32
RNF39Q9H2S5 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
RNF39Q9H2S5 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
RNF39Q9H2S5 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RNF39Q9H2S5 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
RNF39Q9H2S5 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
RNF39Q9H2S5 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.81□□□□□ -1.32
RNF39Q9H2S5 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC6.81□□□□□ -1.32
RNF39Q9H2S5 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.81□□□□□ -1.32
RNF39Q9H2S5 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
RNF39Q9H2S5 LPAL2-203ENST00000454031 2498 ntBASIC6.81□□□□□ -1.32
RNF39Q9H2S5 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF39Q9H2S5 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF39Q9H2S5 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
RNF39Q9H2S5 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF39Q9H2S5 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.8□□□□□ -1.32
RNF39Q9H2S5 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF39Q9H2S5 RNU6-600P-201ENST00000362524 99 ntBASIC6.8□□□□□ -1.32
RNF39Q9H2S5 RNU4-16P-201ENST00000364737 141 ntBASIC6.8□□□□□ -1.32
RNF39Q9H2S5 UBBP2-201ENST00000376781 231 ntBASIC6.8□□□□□ -1.32
RNF39Q9H2S5 RNU6-205P-201ENST00000390858 107 ntBASIC6.8□□□□□ -1.32
RNF39Q9H2S5 RNU6-663P-201ENST00000391105 106 ntBASIC6.8□□□□□ -1.32
RNF39Q9H2S5 AL139095.1-201ENST00000404326 391 ntBASIC6.8□□□□□ -1.32
RNF39Q9H2S5 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF39Q9H2S5 AC068228.1-201ENST00000461723 211 ntBASIC6.8□□□□□ -1.32
RNF39Q9H2S5 AC108729.3-201ENST00000513484 108 ntBASIC6.8□□□□□ -1.32
RNF39Q9H2S5 AC004812.1-201ENST00000540773 146 ntBASIC6.8□□□□□ -1.32
RNF39Q9H2S5 AC079905.1-201ENST00000549280 475 ntBASIC6.8□□□□□ -1.32
RNF39Q9H2S5 MTND6P33-201ENST00000571794 183 ntBASIC6.8□□□□□ -1.32
RNF39Q9H2S5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF39Q9H2S5 AL138895.2-201ENST00000603019 178 ntBASIC6.8□□□□□ -1.32
RNF39Q9H2S5 AC024255.1-201ENST00000614376 102 ntBASIC6.8□□□□□ -1.32
RNF39Q9H2S5 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.8□□□□□ -1.32
RNF39Q9H2S5 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
RNF39Q9H2S5 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
RNF39Q9H2S5 AC022400.9-201ENST00000623633 273 ntBASIC6.8□□□□□ -1.32
RNF39Q9H2S5 AC092821.3-202ENST00000641304 2767 ntBASIC6.8□□□□□ -1.32
RNF39Q9H2S5 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
RNF39Q9H2S5 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF39Q9H2S5 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
RNF39Q9H2S5 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC6.8□□□□□ -1.32
RNF39Q9H2S5 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.8□□□□□ -1.32
RNF39Q9H2S5 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RNF39Q9H2S5 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF39Q9H2S5 OR2AH1P-202ENST00000641232 2744 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms