Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.93□□□□□ -2.1
SLIRPQ9GZT3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 RNU6-859P-201ENST00000362728 107 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 RNU6-931P-201ENST00000363850 107 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 RNU6-512P-201ENST00000364438 103 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 RNA5SP88-201ENST00000365560 109 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 SNORA6-201ENST00000384033 151 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 RNU6-83P-201ENST00000384568 112 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 RNU6-278P-201ENST00000390945 109 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 MTCO2P8-201ENST00000412213 658 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 AC106883.1-201ENST00000418805 562 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 MTCO2P21-201ENST00000419780 677 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 AL353729.1-201ENST00000425044 720 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 AL035407.1-201ENST00000429211 571 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 RPL36AP53-201ENST00000432891 316 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 AC004854.1-201ENST00000440356 349 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 AP000936.2-201ENST00000447151 681 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 BX510359.1-201ENST00000456973 237 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 MTND2P39-201ENST00000457230 764 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 RPL37P6-201ENST00000460682 294 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 AC128713.1-201ENST00000471495 306 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 RPL23AP41-201ENST00000484754 458 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 SCARNA3-201ENST00000517097 143 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 AP000907.2-201ENST00000530827 353 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 AC006199.1-201ENST00000548728 219 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 DUXAP1-201ENST00000556632 463 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 BNIP3P23-201ENST00000599655 511 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 DUXAP9-208ENST00000622815 614 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 AP002791.1-201ENST00000623291 381 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 AC006927.4-201ENST00000639187 543 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 AL365361.1-201ENST00000566942 3481 ntBASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SLIRPQ9GZT3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 NACAP2-201ENST00000318548 624 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 RNU1-52P-201ENST00000384190 164 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 RNU6-920P-201ENST00000410926 92 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 RPS3AP25-201ENST00000411660 793 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 VPS26BP1-201ENST00000417155 755 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 AC104651.1-201ENST00000427559 735 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 RPL7P36-201ENST00000444633 681 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 AC108059.3-201ENST00000456388 214 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 AC087276.1-201ENST00000529659 480 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 AC013828.2-201ENST00000532487 235 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 AC010186.2-204ENST00000537668 439 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 AC022080.3-201ENST00000544433 482 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 ANP32BP3-201ENST00000559213 706 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 MIR5571-201ENST00000577998 113 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 MIR3199-1-201ENST00000582434 88 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 AL451007.1-201ENST00000595491 289 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 AC009314.1-201ENST00000603871 304 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 AC091152.3-201ENST00000604227 325 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 AC011939.3-201ENST00000613686 466 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 AC098657.3-201ENST00000620434 263 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 OR8B1P-202ENST00000641132 1178 ntBASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.91□□□□□ -2.1
SLIRPQ9GZT3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SLIRPQ9GZT3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SLIRPQ9GZT3 SNORA71.3-201ENST00000362582 128 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 RNU6-188P-201ENST00000364207 107 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 RNU6-14P-201ENST00000384630 106 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 MIR670-201ENST00000390142 98 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 NDUFS5P1-201ENST00000405668 289 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 RNU2-40P-201ENST00000410833 196 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AC078974.1-201ENST00000411597 223 ntBASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.9□□□□□ -2.11
SLIRPQ9GZT3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms