Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.75□□□□□ -2.13
TRIM4Q9C037 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.75□□□□□ -2.13
TRIM4Q9C037 RNU7-95P-201ENST00000459222 64 ntBASIC1.75□□□□□ -2.13
TRIM4Q9C037 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.75□□□□□ -2.13
TRIM4Q9C037 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRIM4Q9C037 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.75□□□□□ -2.13
TRIM4Q9C037 AC096745.1-201ENST00000509945 370 ntBASIC1.75□□□□□ -2.13
TRIM4Q9C037 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.75□□□□□ -2.13
TRIM4Q9C037 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRIM4Q9C037 RPS3AP4-201ENST00000555161 764 ntBASIC1.75□□□□□ -2.13
TRIM4Q9C037 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.75□□□□□ -2.13
TRIM4Q9C037 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.75□□□□□ -2.13
TRIM4Q9C037 AC068790.3-201ENST00000602988 553 ntBASIC1.75□□□□□ -2.13
TRIM4Q9C037 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
TRIM4Q9C037 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TRIM4Q9C037 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TRIM4Q9C037 SNORD56.4-201ENST00000363883 71 ntBASIC1.74□□□□□ -2.13
TRIM4Q9C037 AL136133.1-201ENST00000413694 376 ntBASIC1.74□□□□□ -2.13
TRIM4Q9C037 AL161449.1-201ENST00000414531 1199 ntBASIC1.74□□□□□ -2.13
TRIM4Q9C037 HMGB1P49-201ENST00000418882 569 ntBASIC1.74□□□□□ -2.13
TRIM4Q9C037 AC008173.1-201ENST00000418901 264 ntBASIC1.74□□□□□ -2.13
TRIM4Q9C037 EIF1AXP1-201ENST00000419267 435 ntBASIC1.74□□□□□ -2.13
TRIM4Q9C037 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.74□□□□□ -2.13
TRIM4Q9C037 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
TRIM4Q9C037 AC241584.1-201ENST00000438469 1241 ntBASIC1.74□□□□□ -2.13
TRIM4Q9C037 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.74□□□□□ -2.13
TRIM4Q9C037 Z82210.1-201ENST00000440037 231 ntBASIC1.74□□□□□ -2.13
TRIM4Q9C037 AC080013.2-201ENST00000460866 323 ntBASIC1.74□□□□□ -2.13
TRIM4Q9C037 AC087884.1-201ENST00000469738 328 ntBASIC1.74□□□□□ -2.13
TRIM4Q9C037 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.74□□□□□ -2.13
TRIM4Q9C037 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.74□□□□□ -2.13
TRIM4Q9C037 AC098591.2-201ENST00000510152 315 ntBASIC1.74□□□□□ -2.13
TRIM4Q9C037 RNU6-551P-201ENST00000516661 103 ntBASIC1.74□□□□□ -2.13
TRIM4Q9C037 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.74□□□□□ -2.13
TRIM4Q9C037 AC011604.1-201ENST00000545978 196 ntBASIC1.74□□□□□ -2.13
TRIM4Q9C037 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.74□□□□□ -2.13
TRIM4Q9C037 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.74□□□□□ -2.13
TRIM4Q9C037 MIR4452-201ENST00000583004 71 ntBASIC1.74□□□□□ -2.13
TRIM4Q9C037 AC133794.1-201ENST00000602731 914 ntBASIC1.74□□□□□ -2.13
TRIM4Q9C037 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.74□□□□□ -2.13
TRIM4Q9C037 AC008121.1-201ENST00000603244 268 ntBASIC1.74□□□□□ -2.13
TRIM4Q9C037 AC126118.1-201ENST00000607744 628 ntBASIC1.74□□□□□ -2.13
TRIM4Q9C037 AL359740.1-201ENST00000624340 592 ntBASIC1.74□□□□□ -2.13
TRIM4Q9C037 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.74□□□□□ -2.13
TRIM4Q9C037 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TRIM4Q9C037 MTCO1P4-201ENST00000520516 1409 ntBASIC1.74□□□□□ -2.13
TRIM4Q9C037 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TRIM4Q9C037 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TRIM4Q9C037 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
TRIM4Q9C037 SNORA16.1-201ENST00000364597 132 ntBASIC1.73□□□□□ -2.13
TRIM4Q9C037 OR1L1-202ENST00000373686 1083 ntBASIC1.73□□□□□ -2.13
TRIM4Q9C037 RNU6-657P-201ENST00000383904 107 ntBASIC1.73□□□□□ -2.13
TRIM4Q9C037 MIR218-1-201ENST00000384999 110 ntBASIC1.73□□□□□ -2.13
TRIM4Q9C037 MIR9-3-201ENST00000385084 90 ntBASIC1.73□□□□□ -2.13
TRIM4Q9C037 RNU6-750P-201ENST00000390946 107 ntBASIC1.73□□□□□ -2.13
TRIM4Q9C037 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TRIM4Q9C037 AL356432.1-201ENST00000405809 419 ntBASIC1.73□□□□□ -2.13
TRIM4Q9C037 AC004965.1-201ENST00000413033 213 ntBASIC1.73□□□□□ -2.13
TRIM4Q9C037 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.73□□□□□ -2.13
TRIM4Q9C037 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.73□□□□□ -2.13
TRIM4Q9C037 USP9YP15-201ENST00000442391 422 ntBASIC1.73□□□□□ -2.13
TRIM4Q9C037 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.73□□□□□ -2.13
TRIM4Q9C037 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.73□□□□□ -2.13
TRIM4Q9C037 TOMM22P6-201ENST00000465035 409 ntBASIC1.73□□□□□ -2.13
TRIM4Q9C037 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.73□□□□□ -2.13
TRIM4Q9C037 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.73□□□□□ -2.13
TRIM4Q9C037 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.73□□□□□ -2.13
TRIM4Q9C037 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.73□□□□□ -2.13
TRIM4Q9C037 RNA5SP220-201ENST00000516298 104 ntBASIC1.73□□□□□ -2.13
TRIM4Q9C037 RNA5SP135-201ENST00000517019 125 ntBASIC1.73□□□□□ -2.13
TRIM4Q9C037 MIR3683-201ENST00000580847 82 ntBASIC1.73□□□□□ -2.13
TRIM4Q9C037 UBE2L4-201ENST00000587688 464 ntBASIC1.73□□□□□ -2.13
TRIM4Q9C037 AL021997.1-201ENST00000605757 193 ntBASIC1.73□□□□□ -2.13
TRIM4Q9C037 AC132825.7-201ENST00000638744 335 ntBASIC1.73□□□□□ -2.13
TRIM4Q9C037 AC005832.2-201ENST00000538921 1430 ntBASIC1.73□□□□□ -2.13
TRIM4Q9C037 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRIM4Q9C037 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
TRIM4Q9C037 RNU6-1083P-201ENST00000384022 107 ntBASIC1.72□□□□□ -2.13
TRIM4Q9C037 RNU1-148P-201ENST00000384472 162 ntBASIC1.72□□□□□ -2.13
TRIM4Q9C037 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TRIM4Q9C037 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.72□□□□□ -2.13
TRIM4Q9C037 AC093106.2-201ENST00000428212 385 ntBASIC1.72□□□□□ -2.13
TRIM4Q9C037 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.72□□□□□ -2.13
TRIM4Q9C037 AL353689.1-201ENST00000438895 199 ntBASIC1.72□□□□□ -2.13
TRIM4Q9C037 AL360221.1-201ENST00000445989 335 ntBASIC1.72□□□□□ -2.13
TRIM4Q9C037 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.72□□□□□ -2.13
TRIM4Q9C037 AL353691.1-201ENST00000451332 387 ntBASIC1.72□□□□□ -2.13
TRIM4Q9C037 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.72□□□□□ -2.13
TRIM4Q9C037 AL137159.1-201ENST00000452808 512 ntBASIC1.72□□□□□ -2.13
TRIM4Q9C037 MTND2P24-201ENST00000453434 806 ntBASIC1.72□□□□□ -2.13
TRIM4Q9C037 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.72□□□□□ -2.13
TRIM4Q9C037 SNORA31.6-201ENST00000516241 130 ntBASIC1.72□□□□□ -2.13
TRIM4Q9C037 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.72□□□□□ -2.13
TRIM4Q9C037 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.72□□□□□ -2.13
TRIM4Q9C037 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.72□□□□□ -2.13
TRIM4Q9C037 AC090502.2-201ENST00000549267 280 ntBASIC1.72□□□□□ -2.13
TRIM4Q9C037 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.72□□□□□ -2.13
TRIM4Q9C037 MIR4299-201ENST00000577899 72 ntBASIC1.72□□□□□ -2.13
TRIM4Q9C037 DUXAP11-201ENST00000603858 526 ntBASIC1.72□□□□□ -2.13
TRIM4Q9C037 AL161729.4-201ENST00000604650 476 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms