Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 MIR1291-201ENST00000627649 87 ntBASIC3.19□□□□□ -1.9
PCDH11YQ9BZA8 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 RNU5A-1-201ENST00000362698 116 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 SNORA23-201ENST00000365128 182 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 Y_RNA.553-201ENST00000384670 102 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 MIR181B1-201ENST00000385240 110 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 SNORA40.3-201ENST00000390964 122 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 UBE2FP1-201ENST00000416536 447 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AL513477.1-202ENST00000417061 214 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 TIMM9P1-201ENST00000436122 256 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 RPS12P2-201ENST00000439728 269 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AL662791.1-201ENST00000441992 928 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 ELOCP30-201ENST00000447108 299 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 MTND1P29-201ENST00000448112 647 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 SSXP1-201ENST00000453640 473 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AL033528.1-201ENST00000453780 140 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 snoU13.23-201ENST00000458863 104 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 SNORD42A-201ENST00000459584 64 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AC103975.1-201ENST00000482506 483 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 RPS15AP36-201ENST00000492022 382 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 MTND4P2-201ENST00000507767 1203 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 CBX3P3-201ENST00000508108 532 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AC109464.2-201ENST00000510242 943 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 RNA5SP281-201ENST00000516504 135 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 DEFB108A-201ENST00000530110 222 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AP002453.2-201ENST00000533503 320 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AC123904.3-201ENST00000547218 814 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 RPL21P5-201ENST00000554662 472 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 MIR3146-201ENST00000580367 79 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AC009977.1-201ENST00000586015 570 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AC119751.7-201ENST00000600494 245 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AC046143.2-201ENST00000609789 160 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AC103710.1-201ENST00000610003 901 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 BX664608.1-201ENST00000610519 487 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 AC099654.13-201ENST00000639774 207 ntBASIC3.18□□□□□ -1.9
PCDH11YQ9BZA8 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 SDAD1P2-201ENST00000441308 2028 ntBASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 Y_RNA.51-201ENST00000362725 102 ntBASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 Y_RNA.201-201ENST00000364052 96 ntBASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 AL590004.2-201ENST00000404787 371 ntBASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 MIR1290-201ENST00000408735 78 ntBASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 RNU4-26P-201ENST00000410270 107 ntBASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 SPA17P1-201ENST00000416656 452 ntBASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 PGBD4P3-201ENST00000440731 581 ntBASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 AL359273.1-201ENST00000510918 627 ntBASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 AC108747.1-201ENST00000609508 535 ntBASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 AC245517.5-201ENST00000611529 162 ntBASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 AC008250.2-201ENST00000615261 205 ntBASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 AC090582.1-201ENST00000636321 199 ntBASIC3.17□□□□□ -1.9
PCDH11YQ9BZA8 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDH11YQ9BZA8 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDH11YQ9BZA8 MRPL42P2-201ENST00000403169 426 ntBASIC3.16□□□□□ -1.9
PCDH11YQ9BZA8 RPS3AP3-201ENST00000411933 242 ntBASIC3.16□□□□□ -1.9
PCDH11YQ9BZA8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDH11YQ9BZA8 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDH11YQ9BZA8 AC006366.1-201ENST00000422002 759 ntBASIC3.16□□□□□ -1.9
PCDH11YQ9BZA8 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDH11YQ9BZA8 AC010153.1-201ENST00000432862 727 ntBASIC3.16□□□□□ -1.9
PCDH11YQ9BZA8 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDH11YQ9BZA8 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDH11YQ9BZA8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDH11YQ9BZA8 RABEPKP1-201ENST00000440529 1026 ntBASIC3.16□□□□□ -1.9
PCDH11YQ9BZA8 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDH11YQ9BZA8 MTCO3P45-201ENST00000443036 613 ntBASIC3.16□□□□□ -1.9
PCDH11YQ9BZA8 AC096638.1-201ENST00000444678 216 ntBASIC3.16□□□□□ -1.9
PCDH11YQ9BZA8 USP9YP29-201ENST00000445112 563 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms