Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 AC139769.1-204ENST00000472297 1931 ntBASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 AL591135.1-201ENST00000401578 5914 ntBASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 RNU6-222P-201ENST00000362438 107 ntBASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 RNU6-211P-201ENST00000384047 107 ntBASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 RNU6-1144P-201ENST00000384247 104 ntBASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 RNU6-1179P-201ENST00000384667 107 ntBASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 Y_RNA.570-201ENST00000384750 101 ntBASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 RPS4XP3-201ENST00000398541 413 ntBASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 AC114755.2-201ENST00000413520 361 ntBASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 Z82188.1-201ENST00000436709 154 ntBASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 AC074290.1-201ENST00000448883 135 ntBASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 RPS29P27-201ENST00000463711 170 ntBASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 RNU6-589P-201ENST00000516485 107 ntBASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 MIR6875-201ENST00000617506 72 ntBASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL25A1Q9BXS0 AC027228.2-201ENST00000567141 2154 ntBASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 AC110491.1-201ENST00000562191 2010 ntBASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 SNORA22-201ENST00000383907 134 ntBASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 Y_RNA.420-201ENST00000384043 110 ntBASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 Y_RNA.500-201ENST00000384466 111 ntBASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 SNORD56-201ENST00000413522 71 ntBASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 AC015977.1-201ENST00000418887 292 ntBASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 AL445584.1-201ENST00000431451 330 ntBASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 RPS29P7-201ENST00000439662 171 ntBASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 AC073465.2-201ENST00000440938 498 ntBASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 HMGB3P16-201ENST00000508037 287 ntBASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 MIR892C-201ENST00000516410 77 ntBASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 CR383656.7-201ENST00000548164 174 ntBASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 AC090616.3-201ENST00000582184 217 ntBASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 AP005432.2-201ENST00000608162 586 ntBASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 AC019176.2-201ENST00000611579 315 ntBASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 AC062029.1-202ENST00000606164 3651 ntBASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 MAPK10-338ENST00000641647 3362 ntBASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 STX3-208ENST00000641815 3236 ntBASIC5.01□□□□□ -1.61
COL25A1Q9BXS0 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL25A1Q9BXS0 AL022311.1-201ENST00000623726 19416 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5□□□□□ -1.61
COL25A1Q9BXS0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5□□□□□ -1.61
COL25A1Q9BXS0 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5□□□□□ -1.61
COL25A1Q9BXS0 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
COL25A1Q9BXS0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
COL25A1Q9BXS0 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
COL25A1Q9BXS0 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL25A1Q9BXS0 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNU6-37P-201ENST00000362692 107 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNU6-11P-201ENST00000364234 107 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNVU1-3-201ENST00000364313 161 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNA5SP513-201ENST00000364648 118 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNU6-7-201ENST00000364784 107 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNA5SP366-201ENST00000365454 123 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNU6-8-201ENST00000365467 107 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNU6-25P-201ENST00000383873 107 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNU6-1-201ENST00000383898 107 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNU6-36P-201ENST00000384172 107 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNU6-4P-201ENST00000384205 107 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNU6-5P-201ENST00000384238 107 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNU6-3P-201ENST00000384314 107 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNU6-16P-201ENST00000384385 107 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNU6-15P-201ENST00000384534 107 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNU6-2-201ENST00000384627 107 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNU6-29P-201ENST00000384637 107 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 RNU6-9-201ENST00000384776 107 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 SNORA40.19-201ENST00000390846 128 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 POLR2KP2-201ENST00000438155 177 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5□□□□□ -1.61
COL25A1Q9BXS0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5□□□□□ -1.61
COL25A1Q9BXS0 RPL21P126-201ENST00000470049 478 ntBASIC5□□□□□ -1.61
COL25A1Q9BXS0 RPL26P26-201ENST00000480251 434 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms