Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 AC007151.1-201ENST00000572774 483 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 MIR3671-201ENST00000580455 88 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 AC103710.2-201ENST00000609912 942 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 uc_338.11-201ENST00000619132 160 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 AL159972.1-201ENST00000625150 448 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 AC008725.1-201ENST00000605123 2263 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SALL3Q9BXA9 AC073343.1-201ENST00000328239 651 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 Y_RNA.367-201ENST00000365544 101 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4□□□□□ -1.77
SALL3Q9BXA9 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SALL3Q9BXA9 RNU4-26P-201ENST00000410270 107 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 Z92545.1-201ENST00000411782 234 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 RPL31P2-201ENST00000413849 377 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 ARL5AP1-201ENST00000418991 388 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 AL451054.2-201ENST00000420896 202 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4□□□□□ -1.77
SALL3Q9BXA9 MED13P1-201ENST00000428342 171 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 AL353705.1-201ENST00000433468 480 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4□□□□□ -1.77
SALL3Q9BXA9 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4□□□□□ -1.77
SALL3Q9BXA9 PRDX3P3-201ENST00000447765 522 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 AC006539.3-201ENST00000454258 129 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4□□□□□ -1.77
SALL3Q9BXA9 MTCO1P29-201ENST00000496868 288 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4□□□□□ -1.77
SALL3Q9BXA9 GMPSP1-201ENST00000514075 579 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4□□□□□ -1.77
SALL3Q9BXA9 RNU6-1170P-201ENST00000515974 106 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 RN7SKP219-201ENST00000516825 296 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 AP005597.4-201ENST00000526762 229 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4□□□□□ -1.77
SALL3Q9BXA9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4□□□□□ -1.77
SALL3Q9BXA9 SCOCP1-201ENST00000554676 349 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 AC093249.1-201ENST00000567049 203 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4□□□□□ -1.77
SALL3Q9BXA9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4□□□□□ -1.77
SALL3Q9BXA9 uc_338.1-201ENST00000612113 180 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SALL3Q9BXA9 Xist_exon1.1-201ENST00000618930 85 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 SCARNA15.3-201ENST00000626315 122 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 SCARNA4.1-201ENST00000628597 123 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SALL3Q9BXA9 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SALL3Q9BXA9 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4□□□□□ -1.77
SALL3Q9BXA9 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4□□□□□ -1.77
SALL3Q9BXA9 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
SALL3Q9BXA9 BCLAF1P1-201ENST00000505813 2752 ntBASIC4□□□□□ -1.77
SALL3Q9BXA9 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SALL3Q9BXA9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SALL3Q9BXA9 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SALL3Q9BXA9 Y_RNA.22-201ENST00000362492 102 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 U3.12-201ENST00000364498 214 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 SNORD42.2-201ENST00000365570 69 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SALL3Q9BXA9 RNU6-831P-201ENST00000384548 107 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 MIR19A-201ENST00000384878 82 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 AL359634.1-202ENST00000404721 284 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 RNU2-29P-201ENST00000410423 189 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 Y_RNA.615-201ENST00000410769 117 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 BX842559.1-201ENST00000419615 532 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 HSPE1P1-201ENST00000421494 318 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 MTCYBP8-201ENST00000422855 651 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.99□□□□□ -1.77
SALL3Q9BXA9 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.99□□□□□ -1.77
SALL3Q9BXA9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.99□□□□□ -1.77
SALL3Q9BXA9 HMGN1P18-201ENST00000457642 277 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 Y_RNA.639-201ENST00000458981 102 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 RNU7-182P-201ENST00000459009 62 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SALL3Q9BXA9 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.99□□□□□ -1.77
SALL3Q9BXA9 FAM206BP-201ENST00000510179 541 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 RNU2-10P-201ENST00000516375 211 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.99□□□□□ -1.77
SALL3Q9BXA9 AC004024.1-201ENST00000549244 247 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 MIR4513-201ENST00000581077 86 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 MIR4775-201ENST00000581168 75 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.99□□□□□ -1.77
SALL3Q9BXA9 AC073657.2-201ENST00000605661 303 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 AC116312.1-201ENST00000606841 314 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 AC090971.5-201ENST00000621102 293 ntBASIC3.99□□□□□ -1.77
SALL3Q9BXA9 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.99□□□□□ -1.77
SALL3Q9BXA9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SALL3Q9BXA9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SALL3Q9BXA9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
SALL3Q9BXA9 RNA5SP50-201ENST00000363731 107 ntBASIC3.98□□□□□ -1.77
SALL3Q9BXA9 RNU6-38P-201ENST00000384085 107 ntBASIC3.98□□□□□ -1.77
SALL3Q9BXA9 MIR606-201ENST00000384851 96 ntBASIC3.98□□□□□ -1.77
SALL3Q9BXA9 MIR559-201ENST00000385188 96 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms