Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 NIPA2P5-201ENST00000452282 464 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 SNORD97-201ENST00000459187 142 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 RBM43P1-201ENST00000476891 1081 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 RPS27P27-201ENST00000498779 255 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 AC117522.3-201ENST00000507974 584 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 RNU6-720P-201ENST00000516363 108 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 SNORA31.11-201ENST00000516528 139 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 RNU6-840P-201ENST00000517275 65 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 AC093012.1-202ENST00000549403 582 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 AC128657.1-201ENST00000549459 145 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 AC009063.1-201ENST00000563342 702 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 AL391840.1-201ENST00000571144 367 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 AF038458.1-201ENST00000588406 262 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 AL161734.1-201ENST00000609720 557 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 AC103710.2-201ENST00000609912 942 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 MIR7112-201ENST00000616126 65 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 AC006338.1-201ENST00000618453 749 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 AC136475.10-201ENST00000620253 385 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 AC002064.3-201ENST00000623448 346 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 FO624990.1-201ENST00000636373 85 ntBASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC28BQ9BUN5 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 MTCO1P12-201ENST00000414273 1543 ntBASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 RNA5SP393-201ENST00000363423 117 ntBASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 SNORA20.2-201ENST00000383922 131 ntBASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 MIR200C-201ENST00000384980 68 ntBASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 PTMAP2-201ENST00000397627 327 ntBASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 AL359634.1-202ENST00000404721 284 ntBASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 ELOCP4-201ENST00000420090 333 ntBASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 AL049714.1-201ENST00000466686 347 ntBASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 AC023632.4-201ENST00000517783 191 ntBASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 MTCYBP20-201ENST00000524239 1129 ntBASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 AC087883.1-201ENST00000551882 391 ntBASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 AP005205.1-201ENST00000563503 508 ntBASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 EIF1P4-201ENST00000572664 335 ntBASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 MIR3167-201ENST00000579623 85 ntBASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 AC098614.4-201ENST00000607601 462 ntBASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 SDR42E1P2-201ENST00000614861 481 ntBASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 MIR6810-201ENST00000622701 70 ntBASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 AL136313.1-201ENST00000624804 202 ntBASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 AC099654.7-201ENST00000635788 2127 ntBASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC28BQ9BUN5 MTND5P29-201ENST00000458676 1807 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 MIR183-201ENST00000384958 110 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 SNORA48.5-201ENST00000391143 135 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 RNU6-195P-201ENST00000411352 109 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 BX295541.1-201ENST00000417774 250 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AC018630.2-202ENST00000422992 927 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AC008850.1-201ENST00000427546 362 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AC133104.1-201ENST00000429100 218 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AL356867.1-201ENST00000429623 299 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 DNAJC19P4-201ENST00000440115 345 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AC010631.1-201ENST00000474150 156 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AC011825.1-201ENST00000484967 388 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AL358832.1-201ENST00000497800 389 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 RPL37P25-201ENST00000507308 276 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AC091826.1-201ENST00000514065 313 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 SNORA70.16-201ENST00000516390 95 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AC022616.3-201ENST00000523940 148 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 BNIP3P33-201ENST00000598912 569 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AP000860.1-201ENST00000605250 559 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AC010133.1-201ENST00000615809 842 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 MIR7975-201ENST00000619350 68 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AC073534.2-201ENST00000620377 381 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 U6.105-201ENST00000637379 88 ntBASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC28BQ9BUN5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms