Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.15□□□□□ -1.59
USB1Q9BQ65 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.15□□□□□ -1.59
USB1Q9BQ65 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
USB1Q9BQ65 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
USB1Q9BQ65 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
USB1Q9BQ65 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USB1Q9BQ65 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
USB1Q9BQ65 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.14□□□□□ -1.59
USB1Q9BQ65 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USB1Q9BQ65 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
USB1Q9BQ65 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USB1Q9BQ65 AC090971.4-201ENST00000560291 1800 ntBASIC5.14□□□□□ -1.59
USB1Q9BQ65 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.14□□□□□ -1.59
USB1Q9BQ65 RNU6-763P-201ENST00000390865 106 ntBASIC5.14□□□□□ -1.59
USB1Q9BQ65 OR3A2-201ENST00000408891 1076 ntBASIC5.14□□□□□ -1.59
USB1Q9BQ65 FTH1P6-201ENST00000430768 320 ntBASIC5.14□□□□□ -1.59
USB1Q9BQ65 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.14□□□□□ -1.59
USB1Q9BQ65 U8.19-201ENST00000459095 133 ntBASIC5.14□□□□□ -1.59
USB1Q9BQ65 RN7SL273P-201ENST00000481561 299 ntBASIC5.14□□□□□ -1.59
USB1Q9BQ65 CYCTP-201ENST00000504253 315 ntBASIC5.14□□□□□ -1.59
USB1Q9BQ65 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USB1Q9BQ65 RN7SKP122-201ENST00000515923 296 ntBASIC5.14□□□□□ -1.59
USB1Q9BQ65 RNA5SP230-201ENST00000517039 122 ntBASIC5.14□□□□□ -1.59
USB1Q9BQ65 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.14□□□□□ -1.59
USB1Q9BQ65 AC021269.2-201ENST00000532318 330 ntBASIC5.14□□□□□ -1.59
USB1Q9BQ65 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.14□□□□□ -1.59
USB1Q9BQ65 AC010547.6-201ENST00000571789 193 ntBASIC5.14□□□□□ -1.59
USB1Q9BQ65 AC019159.1-201ENST00000605094 187 ntBASIC5.14□□□□□ -1.59
USB1Q9BQ65 AC069294.1-201ENST00000608397 350 ntBASIC5.14□□□□□ -1.59
USB1Q9BQ65 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC5.14□□□□□ -1.59
USB1Q9BQ65 AC006065.5-201ENST00000623427 349 ntBASIC5.14□□□□□ -1.59
USB1Q9BQ65 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.14□□□□□ -1.59
USB1Q9BQ65 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USB1Q9BQ65 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
USB1Q9BQ65 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
USB1Q9BQ65 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
USB1Q9BQ65 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USB1Q9BQ65 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USB1Q9BQ65 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
USB1Q9BQ65 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.13□□□□□ -1.59
USB1Q9BQ65 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
USB1Q9BQ65 AC004076.2-201ENST00000620532 3323 ntBASIC5.13□□□□□ -1.59
USB1Q9BQ65 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
USB1Q9BQ65 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.13□□□□□ -1.59
USB1Q9BQ65 MIR544A-201ENST00000384855 91 ntBASIC5.13□□□□□ -1.59
USB1Q9BQ65 RN7SKP286-201ENST00000410894 299 ntBASIC5.13□□□□□ -1.59
USB1Q9BQ65 AC007969.2-201ENST00000441891 191 ntBASIC5.13□□□□□ -1.59
USB1Q9BQ65 AC010285.1-201ENST00000470580 392 ntBASIC5.13□□□□□ -1.59
USB1Q9BQ65 RPL30P12-201ENST00000474666 353 ntBASIC5.13□□□□□ -1.59
USB1Q9BQ65 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.13□□□□□ -1.59
USB1Q9BQ65 SNORA72.7-201ENST00000516349 94 ntBASIC5.13□□□□□ -1.59
USB1Q9BQ65 RNA5SP170-201ENST00000517150 101 ntBASIC5.13□□□□□ -1.59
USB1Q9BQ65 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
USB1Q9BQ65 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.13□□□□□ -1.59
USB1Q9BQ65 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.13□□□□□ -1.59
USB1Q9BQ65 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.13□□□□□ -1.59
USB1Q9BQ65 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.13□□□□□ -1.59
USB1Q9BQ65 RN7SL544P-201ENST00000617232 284 ntBASIC5.13□□□□□ -1.59
USB1Q9BQ65 RN7SL763P-201ENST00000620922 284 ntBASIC5.13□□□□□ -1.59
USB1Q9BQ65 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.13□□□□□ -1.59
USB1Q9BQ65 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
USB1Q9BQ65 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
USB1Q9BQ65 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
USB1Q9BQ65 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
USB1Q9BQ65 AC008568.2-201ENST00000623862 2313 ntBASIC5.13□□□□□ -1.59
USB1Q9BQ65 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
USB1Q9BQ65 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
USB1Q9BQ65 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.12□□□□□ -1.59
USB1Q9BQ65 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.12□□□□□ -1.59
USB1Q9BQ65 RNU6-1255P-201ENST00000363434 112 ntBASIC5.12□□□□□ -1.59
USB1Q9BQ65 Y_RNA.172-201ENST00000363765 102 ntBASIC5.12□□□□□ -1.59
USB1Q9BQ65 Y_RNA.329-201ENST00000365209 107 ntBASIC5.12□□□□□ -1.59
USB1Q9BQ65 Y_RNA.337-201ENST00000365312 102 ntBASIC5.12□□□□□ -1.59
USB1Q9BQ65 SNORA66-201ENST00000384792 133 ntBASIC5.12□□□□□ -1.59
USB1Q9BQ65 AL512633.1-201ENST00000399931 655 ntBASIC5.12□□□□□ -1.59
USB1Q9BQ65 RNA5SP487-201ENST00000410186 122 ntBASIC5.12□□□□□ -1.59
USB1Q9BQ65 AC009963.1-201ENST00000417265 157 ntBASIC5.12□□□□□ -1.59
USB1Q9BQ65 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.12□□□□□ -1.59
USB1Q9BQ65 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.12□□□□□ -1.59
USB1Q9BQ65 RN7SL570P-201ENST00000484405 292 ntBASIC5.12□□□□□ -1.59
USB1Q9BQ65 RPL32P33-201ENST00000487023 394 ntBASIC5.12□□□□□ -1.59
USB1Q9BQ65 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5.12□□□□□ -1.59
USB1Q9BQ65 RNU6-659P-201ENST00000516454 104 ntBASIC5.12□□□□□ -1.59
USB1Q9BQ65 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
USB1Q9BQ65 AC126615.2-201ENST00000553003 515 ntBASIC5.12□□□□□ -1.59
USB1Q9BQ65 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.12□□□□□ -1.59
USB1Q9BQ65 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.12□□□□□ -1.59
USB1Q9BQ65 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.12□□□□□ -1.59
USB1Q9BQ65 MIR6768-201ENST00000610734 72 ntBASIC5.12□□□□□ -1.59
USB1Q9BQ65 AC011603.4-201ENST00000611325 277 ntBASIC5.12□□□□□ -1.59
USB1Q9BQ65 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.12□□□□□ -1.59
USB1Q9BQ65 AL691477.1-201ENST00000624398 162 ntBASIC5.12□□□□□ -1.59
USB1Q9BQ65 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
USB1Q9BQ65 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USB1Q9BQ65 AC099654.7-201ENST00000635788 2127 ntBASIC5.12□□□□□ -1.59
USB1Q9BQ65 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USB1Q9BQ65 MARK2P15-201ENST00000432204 2186 ntBASIC5.12□□□□□ -1.59
USB1Q9BQ65 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USB1Q9BQ65 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
USB1Q9BQ65 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms