Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC007998.5-201ENST00000622938 237 ntBASIC2.66□□□□□ -1.98
SSX3Q99909 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.66□□□□□ -1.98
SSX3Q99909 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SSX3Q99909 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.98
SSX3Q99909 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
SSX3Q99909 AL355596.1-201ENST00000565399 3996 ntBASIC2.65□□□□□ -1.98
SSX3Q99909 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SSX3Q99909 RNU4-91P-201ENST00000364778 135 ntBASIC2.65□□□□□ -1.99
SSX3Q99909 RNY4P34-201ENST00000364779 95 ntBASIC2.65□□□□□ -1.99
SSX3Q99909 RNU6-817P-201ENST00000391083 104 ntBASIC2.65□□□□□ -1.99
SSX3Q99909 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.65□□□□□ -1.99
SSX3Q99909 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.65□□□□□ -1.99
SSX3Q99909 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.65□□□□□ -1.99
SSX3Q99909 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.65□□□□□ -1.99
SSX3Q99909 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.65□□□□□ -1.99
SSX3Q99909 RPL36AP53-201ENST00000432891 316 ntBASIC2.65□□□□□ -1.99
SSX3Q99909 AL445687.1-201ENST00000439946 251 ntBASIC2.65□□□□□ -1.99
SSX3Q99909 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.65□□□□□ -1.99
SSX3Q99909 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.65□□□□□ -1.99
SSX3Q99909 SNORA74D-201ENST00000516404 141 ntBASIC2.65□□□□□ -1.99
SSX3Q99909 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.65□□□□□ -1.99
SSX3Q99909 AC138761.3-201ENST00000579993 334 ntBASIC2.65□□□□□ -1.99
SSX3Q99909 MIR3682-201ENST00000581338 84 ntBASIC2.65□□□□□ -1.99
SSX3Q99909 CLIC4P2-201ENST00000601934 717 ntBASIC2.65□□□□□ -1.99
SSX3Q99909 AC091304.9-201ENST00000612091 226 ntBASIC2.65□□□□□ -1.99
SSX3Q99909 AL157817.1-201ENST00000614264 790 ntBASIC2.65□□□□□ -1.99
SSX3Q99909 SNORD39.4-201ENST00000620099 78 ntBASIC2.65□□□□□ -1.99
SSX3Q99909 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.65□□□□□ -1.99
SSX3Q99909 AL137003.2-201ENST00000606924 2538 ntBASIC2.65□□□□□ -1.99
SSX3Q99909 AL359693.1-201ENST00000614959 2407 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SSX3Q99909 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SSX3Q99909 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
SSX3Q99909 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.64□□□□□ -1.99
SSX3Q99909 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SSX3Q99909 RNU6-960P-201ENST00000364056 120 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 RNU6-188P-201ENST00000364207 107 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 RNY1P12-201ENST00000364251 105 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SSX3Q99909 SNORA46-201ENST00000384762 135 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 AC127391.1-201ENST00000411737 98 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 HMGN2P35-201ENST00000412164 270 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 AC063979.1-201ENST00000415539 377 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 ISCA1P1-201ENST00000426679 387 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SSX3Q99909 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.64□□□□□ -1.99
SSX3Q99909 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.64□□□□□ -1.99
SSX3Q99909 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.64□□□□□ -1.99
SSX3Q99909 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.64□□□□□ -1.99
SSX3Q99909 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.64□□□□□ -1.99
SSX3Q99909 UQCRHP3-201ENST00000451503 251 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 FABP5P15-201ENST00000453566 214 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.64□□□□□ -1.99
SSX3Q99909 AC107626.1-201ENST00000471084 183 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.64□□□□□ -1.99
SSX3Q99909 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.64□□□□□ -1.99
SSX3Q99909 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.64□□□□□ -1.99
SSX3Q99909 AC091965.2-201ENST00000512324 613 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.64□□□□□ -1.99
SSX3Q99909 RNU6-143P-201ENST00000516942 93 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 RNU2-46P-201ENST00000517038 113 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 HMGB1P41-201ENST00000520234 440 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 AP002453.2-201ENST00000533503 320 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.64□□□□□ -1.99
SSX3Q99909 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.64□□□□□ -1.99
SSX3Q99909 AC005476.1-201ENST00000554427 397 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 AL359212.1-201ENST00000556608 614 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 AC137800.2-201ENST00000574375 120 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 MIR3200-201ENST00000580767 85 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 AC005771.1-201ENST00000585581 349 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 AP002360.4-201ENST00000606980 481 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 uc_338.1-201ENST00000612113 180 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 AL365204.3-201ENST00000612448 685 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 AC025594.3-201ENST00000613068 790 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 AL133173.2-201ENST00000614270 90 ntBASIC2.64□□□□□ -1.99
SSX3Q99909 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SSX3Q99909 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
SSX3Q99909 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SSX3Q99909 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.64□□□□□ -1.99
SSX3Q99909 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
SSX3Q99909 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.64□□□□□ -1.99
SSX3Q99909 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SSX3Q99909 AC073343.1-201ENST00000328239 651 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 U8.3-201ENST00000363321 132 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 RNU6-525P-201ENST00000363685 104 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 RN7SKP226-201ENST00000364912 300 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.63□□□□□ -1.99
SSX3Q99909 RNU6-946P-201ENST00000383878 107 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 AL512633.1-201ENST00000399931 655 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 RNU4-47P-201ENST00000410876 114 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 RPS12P24-201ENST00000412619 387 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 AC098826.1-201ENST00000433943 471 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 RPS24P13-201ENST00000442520 397 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 Z75741.1-201ENST00000446793 314 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.63□□□□□ -1.99
SSX3Q99909 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.63□□□□□ -1.99
SSX3Q99909 GSTA11P-201ENST00000452866 669 ntBASIC2.63□□□□□ -1.99
SSX3Q99909 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.63□□□□□ -1.99
SSX3Q99909 RAP1BP2-201ENST00000478270 544 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms