Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.35□□□□□ -1.87
NPAS1Q99742 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPAS1Q99742 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPAS1Q99742 Y_RNA.86-201ENST00000363020 111 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 Y_RNA.160-201ENST00000363677 92 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 SNORA73.2-201ENST00000364946 201 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 RNU6-393P-201ENST00000384475 107 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NPAS1Q99742 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NPAS1Q99742 SNORD70.1-201ENST00000391007 85 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 AL445189.1-201ENST00000405722 338 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 RNU4-26P-201ENST00000410270 107 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 RNA5SP118-201ENST00000410385 109 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 RNU2-68P-201ENST00000410878 191 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 SNORA57.3-201ENST00000411095 141 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.35□□□□□ -1.87
NPAS1Q99742 AC009161.1-201ENST00000417306 376 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.35□□□□□ -1.87
NPAS1Q99742 NEK4P1-201ENST00000433383 879 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 MTND3P10-201ENST00000450967 341 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.35□□□□□ -1.87
NPAS1Q99742 RNU7-180P-201ENST00000459240 63 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 RPL30P14-201ENST00000482744 348 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.35□□□□□ -1.87
NPAS1Q99742 AC074344.1-201ENST00000512823 224 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.35□□□□□ -1.87
NPAS1Q99742 PHBP14-201ENST00000512887 367 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 RNU6-1282P-201ENST00000516735 96 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 AC134698.4-201ENST00000523451 826 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.35□□□□□ -1.87
NPAS1Q99742 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.35□□□□□ -1.87
NPAS1Q99742 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.35□□□□□ -1.87
NPAS1Q99742 AC004805.2-201ENST00000605382 482 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 Z82243.1-201ENST00000609432 473 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
NPAS1Q99742 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
NPAS1Q99742 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.35□□□□□ -1.87
NPAS1Q99742 AC012442.3-202ENST00000636742 206 ntBASIC3.35□□□□□ -1.87
NPAS1Q99742 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.35□□□□□ -1.87
NPAS1Q99742 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.35□□□□□ -1.87
NPAS1Q99742 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.35□□□□□ -1.87
NPAS1Q99742 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
NPAS1Q99742 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
NPAS1Q99742 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPAS1Q99742 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
NPAS1Q99742 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPAS1Q99742 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.34□□□□□ -1.87
NPAS1Q99742 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
NPAS1Q99742 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPAS1Q99742 AC007656.2-201ENST00000624902 4547 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 AL139276.1-201ENST00000311910 1001 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 Y_RNA.231-201ENST00000364358 102 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 RNU6-715P-201ENST00000365204 103 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 RNA5SP424-201ENST00000390988 115 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 RPS4XP7-201ENST00000406274 780 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 AP000567.1-201ENST00000406413 156 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 EEF1A1P40-201ENST00000412883 573 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 RPL21P90-201ENST00000415692 466 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 RPL21P109-201ENST00000422213 475 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 AC012498.1-201ENST00000424037 437 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 ERLEC1P1-201ENST00000433806 578 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 GOT2P5-201ENST00000433995 546 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.34□□□□□ -1.87
NPAS1Q99742 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.34□□□□□ -1.87
NPAS1Q99742 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 VN1R34P-201ENST00000447387 883 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.34□□□□□ -1.87
NPAS1Q99742 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.34□□□□□ -1.87
NPAS1Q99742 AC091885.1-201ENST00000506658 268 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 AC006445.2-201ENST00000510061 472 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.34□□□□□ -1.87
NPAS1Q99742 LRRC34P2-201ENST00000514850 553 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 RNU6-1315P-201ENST00000517187 99 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 TRMT10BP1-201ENST00000519377 943 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.34□□□□□ -1.87
NPAS1Q99742 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.34□□□□□ -1.87
NPAS1Q99742 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.34□□□□□ -1.87
NPAS1Q99742 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.34□□□□□ -1.87
NPAS1Q99742 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.34□□□□□ -1.87
NPAS1Q99742 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.34□□□□□ -1.87
NPAS1Q99742 MIR4425-201ENST00000580572 84 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 MIR5583-1-201ENST00000580941 59 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 MIR548AC-201ENST00000585049 88 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 AC060780.3-201ENST00000589464 80 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
NPAS1Q99742 U6.42-201ENST00000618440 107 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.34□□□□□ -1.87
NPAS1Q99742 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.34□□□□□ -1.87
NPAS1Q99742 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.34□□□□□ -1.87
NPAS1Q99742 MIR7153-201ENST00000637758 57 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 AC007496.3-201ENST00000624987 3443 ntBASIC3.34□□□□□ -1.87
NPAS1Q99742 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPAS1Q99742 AC091152.2-201ENST00000591628 2569 ntBASIC3.34□□□□□ -1.88
NPAS1Q99742 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
NPAS1Q99742 AC007823.1-201ENST00000569932 1566 ntBASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms