Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 SNORA70B-201ENST00000384210 135 ntBASIC1.92□□□□□ -2.1
VAT1Q99536 AL590084.1-201ENST00000407885 387 ntBASIC1.92□□□□□ -2.1
VAT1Q99536 RNA5SP489-201ENST00000410986 109 ntBASIC1.92□□□□□ -2.1
VAT1Q99536 NDUFS5P4-201ENST00000412983 318 ntBASIC1.92□□□□□ -2.1
VAT1Q99536 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.92□□□□□ -2.1
VAT1Q99536 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.92□□□□□ -2.1
VAT1Q99536 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.92□□□□□ -2.1
VAT1Q99536 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.92□□□□□ -2.1
VAT1Q99536 HMGB1P36-201ENST00000487709 576 ntBASIC1.92□□□□□ -2.1
VAT1Q99536 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.92□□□□□ -2.1
VAT1Q99536 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.92□□□□□ -2.1
VAT1Q99536 RNA5SP182-201ENST00000516064 82 ntBASIC1.92□□□□□ -2.1
VAT1Q99536 RNU6-150P-201ENST00000516237 95 ntBASIC1.92□□□□□ -2.1
VAT1Q99536 MIR514B-201ENST00000516774 80 ntBASIC1.92□□□□□ -2.1
VAT1Q99536 MTCO2P15-201ENST00000532655 656 ntBASIC1.92□□□□□ -2.1
VAT1Q99536 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.92□□□□□ -2.1
VAT1Q99536 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.92□□□□□ -2.1
VAT1Q99536 AF038458.1-201ENST00000588406 262 ntBASIC1.92□□□□□ -2.1
VAT1Q99536 AC005261.5-201ENST00000596280 355 ntBASIC1.92□□□□□ -2.1
VAT1Q99536 AC107075.1-201ENST00000613695 314 ntBASIC1.92□□□□□ -2.1
VAT1Q99536 AC126544.2-201ENST00000625174 749 ntBASIC1.92□□□□□ -2.1
VAT1Q99536 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
VAT1Q99536 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
VAT1Q99536 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.91□□□□□ -2.1
VAT1Q99536 RNA5SP125-201ENST00000364843 120 ntBASIC1.91□□□□□ -2.1
VAT1Q99536 AL079342.1-201ENST00000401460 267 ntBASIC1.91□□□□□ -2.1
VAT1Q99536 UBE2FP1-201ENST00000416536 447 ntBASIC1.91□□□□□ -2.1
VAT1Q99536 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.91□□□□□ -2.1
VAT1Q99536 ELOCP14-201ENST00000428070 331 ntBASIC1.91□□□□□ -2.1
VAT1Q99536 AC010153.1-201ENST00000432862 727 ntBASIC1.91□□□□□ -2.1
VAT1Q99536 ELOCP7-201ENST00000439968 331 ntBASIC1.91□□□□□ -2.1
VAT1Q99536 GPM6BP3-201ENST00000442797 145 ntBASIC1.91□□□□□ -2.1
VAT1Q99536 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.91□□□□□ -2.1
VAT1Q99536 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.91□□□□□ -2.1
VAT1Q99536 CECR9-201ENST00000453421 199 ntBASIC1.91□□□□□ -2.1
VAT1Q99536 RPS15AP36-201ENST00000492022 382 ntBASIC1.91□□□□□ -2.1
VAT1Q99536 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.91□□□□□ -2.1
VAT1Q99536 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.91□□□□□ -2.1
VAT1Q99536 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.91□□□□□ -2.1
VAT1Q99536 AC093752.1-206ENST00000511823 336 ntBASIC1.91□□□□□ -2.1
VAT1Q99536 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.91□□□□□ -2.1
VAT1Q99536 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.91□□□□□ -2.1
VAT1Q99536 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.91□□□□□ -2.1
VAT1Q99536 CYCSP2-201ENST00000558168 301 ntBASIC1.91□□□□□ -2.1
VAT1Q99536 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.91□□□□□ -2.1
VAT1Q99536 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.91□□□□□ -2.1
VAT1Q99536 AC024619.4-201ENST00000580924 316 ntBASIC1.91□□□□□ -2.1
VAT1Q99536 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.91□□□□□ -2.1
VAT1Q99536 AC024060.1-201ENST00000607052 494 ntBASIC1.91□□□□□ -2.1
VAT1Q99536 MIR7157-201ENST00000635801 60 ntBASIC1.91□□□□□ -2.1
VAT1Q99536 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
VAT1Q99536 AL359851.1-201ENST00000569460 4997 ntBASIC1.9□□□□□ -2.1
VAT1Q99536 FAM133CP-201ENST00000332869 704 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 RNU6-223P-201ENST00000362830 107 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 RNU6-432P-201ENST00000384196 109 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 SNORD23.1-201ENST00000408212 104 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 MTCYBP38-201ENST00000417160 1123 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 BTF3L4P3-201ENST00000418879 476 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.9□□□□□ -2.11
VAT1Q99536 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.9□□□□□ -2.11
VAT1Q99536 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.9□□□□□ -2.11
VAT1Q99536 RPL35AP22-201ENST00000436855 335 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.9□□□□□ -2.11
VAT1Q99536 FABP5P13-201ENST00000452144 328 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.9□□□□□ -2.11
VAT1Q99536 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.9□□□□□ -2.11
VAT1Q99536 AC104563.1-201ENST00000476147 376 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 AC072039.1-201ENST00000477611 581 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 RN7SL274P-201ENST00000492268 272 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.9□□□□□ -2.11
VAT1Q99536 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.9□□□□□ -2.11
VAT1Q99536 AC112198.4-201ENST00000515450 351 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.9□□□□□ -2.11
VAT1Q99536 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.9□□□□□ -2.11
VAT1Q99536 NACAP3-201ENST00000552100 481 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.9□□□□□ -2.11
VAT1Q99536 AL512347.1-201ENST00000566420 503 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 RPP40P2-201ENST00000603596 712 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 AC093673.2-201ENST00000609674 331 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 AC107308.1-201ENST00000615897 301 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
VAT1Q99536 AL162373.1-201ENST00000620433 407 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 uc_338.20-201ENST00000621563 178 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 MIR3199-2-201ENST00000636243 86 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
VAT1Q99536 AC011477.1-204ENST00000623416 1325 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 AC092447.10-201ENST00000620607 1652 ntBASIC1.9□□□□□ -2.11
VAT1Q99536 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
VAT1Q99536 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VAT1Q99536 RNU4-51P-201ENST00000364206 140 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 Y_RNA.245-201ENST00000364493 95 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
VAT1Q99536 MIR23A-201ENST00000385245 73 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 SNORA46.1-201ENST00000391069 153 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 RNU2-20P-201ENST00000410425 191 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 NPM1P11-201ENST00000417106 855 ntBASIC1.89□□□□□ -2.11
VAT1Q99536 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.89□□□□□ -2.11
VAT1Q99536 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.89□□□□□ -2.11
VAT1Q99536 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.89□□□□□ -2.11
VAT1Q99536 MTND1P28-201ENST00000435623 950 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms