Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AL355297.2-201ENST00000604792 129 ntBASIC1.41□□□□□ -2.18
CDK5RAP2Q96SN8 SNORD14A-201ENST00000606526 91 ntBASIC1.41□□□□□ -2.18
CDK5RAP2Q96SN8 AP000238.1-201ENST00000608759 426 ntBASIC1.41□□□□□ -2.18
CDK5RAP2Q96SN8 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CDK5RAP2Q96SN8 RNY1-201ENST00000364228 113 ntBASIC1.41□□□□□ -2.18
CDK5RAP2Q96SN8 RNU4-91P-201ENST00000364778 135 ntBASIC1.41□□□□□ -2.18
CDK5RAP2Q96SN8 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.41□□□□□ -2.18
CDK5RAP2Q96SN8 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.41□□□□□ -2.18
CDK5RAP2Q96SN8 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.41□□□□□ -2.18
CDK5RAP2Q96SN8 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.41□□□□□ -2.18
CDK5RAP2Q96SN8 AC023141.11-201ENST00000508864 202 ntBASIC1.41□□□□□ -2.18
CDK5RAP2Q96SN8 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.41□□□□□ -2.18
CDK5RAP2Q96SN8 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.41□□□□□ -2.18
CDK5RAP2Q96SN8 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.41□□□□□ -2.18
CDK5RAP2Q96SN8 AC018618.2-201ENST00000604770 446 ntBASIC1.41□□□□□ -2.18
CDK5RAP2Q96SN8 AC025588.2-201ENST00000604851 466 ntBASIC1.41□□□□□ -2.18
CDK5RAP2Q96SN8 AC091932.3-201ENST00000624223 323 ntBASIC1.41□□□□□ -2.18
CDK5RAP2Q96SN8 RNU1-72P-201ENST00000362976 153 ntBASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 SNORA16B-201ENST00000364674 135 ntBASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 RNA5SP240-201ENST00000365355 128 ntBASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 RNU6-444P-201ENST00000383988 108 ntBASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 AP002784.2-201ENST00000397300 549 ntBASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 HMGB1P49-201ENST00000418882 569 ntBASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 KATNBL1P3-201ENST00000443475 909 ntBASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 AC007395.1-201ENST00000451333 677 ntBASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 AC092757.1-201ENST00000467293 467 ntBASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 RPL30P5-201ENST00000494923 336 ntBASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 AC093752.1-206ENST00000511823 336 ntBASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 CR383656.7-201ENST00000548164 174 ntBASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 AC074029.2-201ENST00000551045 634 ntBASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 AL391261.3-201ENST00000557194 520 ntBASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 AC097468.3-201ENST00000607956 456 ntBASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 MIR6788-201ENST00000618842 66 ntBASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 AP003400.5-201ENST00000624827 617 ntBASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 AC017104.5-201ENST00000637647 639 ntBASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 LINC02211-204ENST00000642024 1070 ntBASIC1.4□□□□□ -2.19
CDK5RAP2Q96SN8 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 TAF9BP2-201ENST00000400856 499 ntBASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 TAAR7P-201ENST00000436141 242 ntBASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 AC004865.1-201ENST00000442276 1003 ntBASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 AC112518.2-201ENST00000508565 425 ntBASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 RN7SKP49-201ENST00000516675 260 ntBASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 MIR3198-2-201ENST00000577868 80 ntBASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 AC091895.1-201ENST00000624494 256 ntBASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 SNORD51-201ENST00000384320 80 ntBASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 MIR325-201ENST00000385260 98 ntBASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 MIR1290-201ENST00000408735 78 ntBASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 MIR548J-201ENST00000408833 112 ntBASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 BEND7P1-201ENST00000422058 457 ntBASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 MTCO3P46-201ENST00000425787 232 ntBASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 AC012497.1-201ENST00000429392 575 ntBASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 KLF3P2-201ENST00000465138 268 ntBASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 HMGN2P15-201ENST00000585707 270 ntBASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 AC073413.2-201ENST00000604332 360 ntBASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 AC006213.4-201ENST00000616184 634 ntBASIC1.39□□□□□ -2.19
CDK5RAP2Q96SN8 MIR150-201ENST00000385048 84 ntBASIC1.38□□□□□ -2.19
CDK5RAP2Q96SN8 AC023141.4-201ENST00000412031 328 ntBASIC1.38□□□□□ -2.19
CDK5RAP2Q96SN8 AC010385.1-201ENST00000412374 256 ntBASIC1.38□□□□□ -2.19
CDK5RAP2Q96SN8 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.38□□□□□ -2.19
CDK5RAP2Q96SN8 AL121601.2-201ENST00000438019 707 ntBASIC1.38□□□□□ -2.19
CDK5RAP2Q96SN8 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.38□□□□□ -2.19
CDK5RAP2Q96SN8 AL049714.1-201ENST00000466686 347 ntBASIC1.38□□□□□ -2.19
CDK5RAP2Q96SN8 LTV1P1-201ENST00000510683 1237 ntBASIC1.38□□□□□ -2.19
CDK5RAP2Q96SN8 AP005639.2-201ENST00000527592 928 ntBASIC1.38□□□□□ -2.19
CDK5RAP2Q96SN8 CYCSP2-201ENST00000558168 301 ntBASIC1.38□□□□□ -2.19
CDK5RAP2Q96SN8 MTCYBP23-201ENST00000558717 1102 ntBASIC1.38□□□□□ -2.19
CDK5RAP2Q96SN8 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.38□□□□□ -2.19
CDK5RAP2Q96SN8 AC083806.3-201ENST00000614016 455 ntBASIC1.38□□□□□ -2.19
CDK5RAP2Q96SN8 AC073968.1-201ENST00000618594 637 ntBASIC1.38□□□□□ -2.19
CDK5RAP2Q96SN8 AC109809.1-201ENST00000619665 545 ntBASIC1.38□□□□□ -2.19
CDK5RAP2Q96SN8 AC068057.2-201ENST00000624047 895 ntBASIC1.38□□□□□ -2.19
CDK5RAP2Q96SN8 ZNF702P-202ENST00000434269 1966 ntBASIC1.38□□□□□ -2.19
CDK5RAP2Q96SN8 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CDK5RAP2Q96SN8 AL049641.1-201ENST00000441055 1948 ntBASIC1.37□□□□□ -2.19
CDK5RAP2Q96SN8 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CDK5RAP2Q96SN8 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDK5RAP2Q96SN8 RNU6-819P-201ENST00000364116 107 ntBASIC1.37□□□□□ -2.19
CDK5RAP2Q96SN8 RNU6-217P-201ENST00000384164 104 ntBASIC1.37□□□□□ -2.19
CDK5RAP2Q96SN8 RPL7P27-201ENST00000403775 720 ntBASIC1.37□□□□□ -2.19
CDK5RAP2Q96SN8 SRIP3-201ENST00000413200 219 ntBASIC1.37□□□□□ -2.19
CDK5RAP2Q96SN8 AL109913.1-201ENST00000421173 514 ntBASIC1.37□□□□□ -2.19
CDK5RAP2Q96SN8 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.37□□□□□ -2.19
CDK5RAP2Q96SN8 RPP40P1-201ENST00000426762 456 ntBASIC1.37□□□□□ -2.19
CDK5RAP2Q96SN8 AL512637.2-201ENST00000431287 1256 ntBASIC1.37□□□□□ -2.19
CDK5RAP2Q96SN8 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.37□□□□□ -2.19
CDK5RAP2Q96SN8 AC005410.1-202ENST00000460347 485 ntBASIC1.37□□□□□ -2.19
CDK5RAP2Q96SN8 AC015724.1-201ENST00000478577 156 ntBASIC1.37□□□□□ -2.19
CDK5RAP2Q96SN8 AC027575.1-201ENST00000481064 460 ntBASIC1.37□□□□□ -2.19
CDK5RAP2Q96SN8 AC020699.1-201ENST00000505161 445 ntBASIC1.37□□□□□ -2.19
CDK5RAP2Q96SN8 ARL2BPP4-201ENST00000506854 471 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms