Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.53□□□□□ -2
VPS35Q96QK1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.53□□□□□ -2
VPS35Q96QK1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
VPS35Q96QK1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS35Q96QK1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.52□□□□□ -2.01
VPS35Q96QK1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS35Q96QK1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS35Q96QK1 AL365361.1-201ENST00000566942 3481 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 RNU6-778P-201ENST00000363269 103 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 RNU6-1214P-201ENST00000363650 109 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 RNA5SP68-201ENST00000363885 119 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 RN7SKP226-201ENST00000364912 300 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 RNU1-73P-201ENST00000383971 164 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS35Q96QK1 RNU2-68P-201ENST00000410878 191 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 NDUFS5P4-201ENST00000412983 318 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 AC080125.1-201ENST00000414888 684 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 RPL23AP39-201ENST00000415533 405 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS35Q96QK1 AC104651.1-201ENST00000427559 735 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VPS35Q96QK1 HMGB1P9-201ENST00000429856 646 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS35Q96QK1 GPM6BP2-201ENST00000432046 144 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 GPM6BP1-201ENST00000446387 144 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VPS35Q96QK1 SNORA31.3-201ENST00000516029 96 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 AP003461.1-201ENST00000528866 78 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.52□□□□□ -2.01
VPS35Q96QK1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
VPS35Q96QK1 MIR5194-201ENST00000582634 120 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 MIR6817-201ENST00000615588 66 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS35Q96QK1 AC110491.1-201ENST00000562191 2010 ntBASIC2.52□□□□□ -2.01
VPS35Q96QK1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS35Q96QK1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.52□□□□□ -2.01
VPS35Q96QK1 AC093536.2-201ENST00000565257 1406 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
VPS35Q96QK1 UBE2L2-201ENST00000254302 429 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 RNU6-512P-201ENST00000364438 103 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS35Q96QK1 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS35Q96QK1 RNU6-750P-201ENST00000390946 107 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 RNA5SP210-201ENST00000391034 120 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 RPL26P27-201ENST00000414397 437 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 ZNF90P2-204ENST00000419323 1075 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.51□□□□□ -2.01
VPS35Q96QK1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS35Q96QK1 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS35Q96QK1 MED14P1-201ENST00000430517 648 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 HMGB1P27-201ENST00000431429 603 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 RPL36AP53-201ENST00000432891 316 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 Z80107.1-201ENST00000436830 412 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS35Q96QK1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS35Q96QK1 FABP5P15-201ENST00000453566 214 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 RPS15AP34-201ENST00000487776 387 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.51□□□□□ -2.01
VPS35Q96QK1 AC098591.2-201ENST00000510152 315 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 AC008716.1-201ENST00000511084 513 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 RN7SKP265-201ENST00000516448 223 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 RNU6-1003P-201ENST00000517099 105 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 RNA5SP402-201ENST00000517148 110 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.51□□□□□ -2.01
VPS35Q96QK1 COX6CP5-201ENST00000527162 228 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS35Q96QK1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS35Q96QK1 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS35Q96QK1 AC234772.3-201ENST00000602277 528 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 KC877982.1-201ENST00000602313 470 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 NRBF2P5-201ENST00000603087 788 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 AL391813.2-201ENST00000609113 322 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 AC108747.1-201ENST00000609508 535 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 AC107294.1-201ENST00000609524 467 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 AC011890.2-201ENST00000613393 294 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS35Q96QK1 U4.3-201ENST00000621047 82 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 MIR7515-201ENST00000637837 67 ntBASIC2.51□□□□□ -2.01
VPS35Q96QK1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.5□□□□□ -2.01
VPS35Q96QK1 RNA5SP456-201ENST00000364002 114 ntBASIC2.5□□□□□ -2.01
VPS35Q96QK1 RPS20P2-201ENST00000402520 389 ntBASIC2.5□□□□□ -2.01
VPS35Q96QK1 AL021407.1-201ENST00000404531 386 ntBASIC2.5□□□□□ -2.01
VPS35Q96QK1 ELOCP17-201ENST00000414751 326 ntBASIC2.5□□□□□ -2.01
VPS35Q96QK1 RPS27AP14-201ENST00000422868 454 ntBASIC2.5□□□□□ -2.01
VPS35Q96QK1 ISCA1P1-201ENST00000426679 387 ntBASIC2.5□□□□□ -2.01
VPS35Q96QK1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.5□□□□□ -2.01
VPS35Q96QK1 AC098831.1-201ENST00000440661 216 ntBASIC2.5□□□□□ -2.01
VPS35Q96QK1 GDI2P2-201ENST00000445131 608 ntBASIC2.5□□□□□ -2.01
VPS35Q96QK1 SRIP1-201ENST00000489235 288 ntBASIC2.5□□□□□ -2.01
VPS35Q96QK1 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.5□□□□□ -2.01
VPS35Q96QK1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.5□□□□□ -2.01
VPS35Q96QK1 AC116347.2-201ENST00000514912 523 ntBASIC2.5□□□□□ -2.01
VPS35Q96QK1 RN7SKP24-201ENST00000515888 284 ntBASIC2.5□□□□□ -2.01
VPS35Q96QK1 RNA5SP320-201ENST00000516263 124 ntBASIC2.5□□□□□ -2.01
VPS35Q96QK1 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.5□□□□□ -2.01
VPS35Q96QK1 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms