Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 snoU109.1-201ENST00000459339 135 ntBASIC3.24□□□□□ -1.89
NEK1Q96PY6 RPS20P20-201ENST00000460498 340 ntBASIC3.24□□□□□ -1.89
NEK1Q96PY6 RN7SL432P-201ENST00000484057 298 ntBASIC3.24□□□□□ -1.89
NEK1Q96PY6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.24□□□□□ -1.89
NEK1Q96PY6 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.24□□□□□ -1.89
NEK1Q96PY6 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.24□□□□□ -1.89
NEK1Q96PY6 AC105313.1-201ENST00000509121 353 ntBASIC3.24□□□□□ -1.89
NEK1Q96PY6 SCARNA15.2-201ENST00000516409 127 ntBASIC3.24□□□□□ -1.89
NEK1Q96PY6 AP000873.5-201ENST00000533906 236 ntBASIC3.24□□□□□ -1.89
NEK1Q96PY6 AC079600.2-201ENST00000550076 130 ntBASIC3.24□□□□□ -1.89
NEK1Q96PY6 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.24□□□□□ -1.89
NEK1Q96PY6 HMGB1P14-201ENST00000557424 591 ntBASIC3.24□□□□□ -1.89
NEK1Q96PY6 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.24□□□□□ -1.89
NEK1Q96PY6 AC006362.1-201ENST00000567392 174 ntBASIC3.24□□□□□ -1.89
NEK1Q96PY6 MIR4319-201ENST00000577285 85 ntBASIC3.24□□□□□ -1.89
NEK1Q96PY6 AC005771.1-201ENST00000585581 349 ntBASIC3.24□□□□□ -1.89
NEK1Q96PY6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.24□□□□□ -1.89
NEK1Q96PY6 AC079089.3-201ENST00000603094 673 ntBASIC3.24□□□□□ -1.89
NEK1Q96PY6 AP000860.1-201ENST00000605250 559 ntBASIC3.24□□□□□ -1.89
NEK1Q96PY6 AC093783.1-201ENST00000612976 329 ntBASIC3.24□□□□□ -1.89
NEK1Q96PY6 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.24□□□□□ -1.89
NEK1Q96PY6 AC027309.3-201ENST00000623419 351 ntBASIC3.24□□□□□ -1.89
NEK1Q96PY6 AC099654.13-201ENST00000639774 207 ntBASIC3.24□□□□□ -1.89
NEK1Q96PY6 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.24□□□□□ -1.89
NEK1Q96PY6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NEK1Q96PY6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NEK1Q96PY6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.23□□□□□ -1.89
NEK1Q96PY6 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NEK1Q96PY6 RNU4-40P-201ENST00000364351 143 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 AL138827.1-201ENST00000402666 306 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 MIR1261-201ENST00000408659 82 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 RNA5SP344-201ENST00000411081 104 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.23□□□□□ -1.89
NEK1Q96PY6 USP12PX-201ENST00000432383 1057 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 AC087499.2-201ENST00000432861 149 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 AC119618.1-201ENST00000434191 222 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 RPS24P13-201ENST00000442520 397 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 AL022238.1-201ENST00000442557 355 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 USP9YP29-201ENST00000445112 563 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.23□□□□□ -1.89
NEK1Q96PY6 AL031183.1-201ENST00000457667 207 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 RPL23AP11-201ENST00000475260 469 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 AC090525.1-201ENST00000479116 478 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 AC010587.1-201ENST00000505809 469 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.23□□□□□ -1.89
NEK1Q96PY6 CDC42P4-201ENST00000510507 563 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 Y_RNA.672-201ENST00000516289 104 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 AC093012.1-202ENST00000549403 582 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.23□□□□□ -1.89
NEK1Q96PY6 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.23□□□□□ -1.89
NEK1Q96PY6 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.23□□□□□ -1.89
NEK1Q96PY6 MIR3609-201ENST00000582661 80 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.23□□□□□ -1.89
NEK1Q96PY6 AC040904.1-201ENST00000590850 223 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 RSL24D1P11-201ENST00000591045 491 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 NUTF2P8-201ENST00000604593 363 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 AC080013.6-201ENST00000606185 215 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 AC013476.2-201ENST00000614456 459 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 uc_338.12-201ENST00000616344 181 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 AC009090.3-201ENST00000616553 565 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 SNHG22-203ENST00000617833 660 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 CR381653.2-201ENST00000624041 768 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 AC110994.2-201ENST00000635481 492 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 IGHVIII-44-202ENST00000636235 289 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 AC090582.1-201ENST00000636321 199 ntBASIC3.23□□□□□ -1.89
NEK1Q96PY6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NEK1Q96PY6 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NEK1Q96PY6 TEX21P-201ENST00000447107 1476 ntBASIC3.22□□□□□ -1.89
NEK1Q96PY6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.22□□□□□ -1.89
NEK1Q96PY6 Y_RNA.201-201ENST00000364052 96 ntBASIC3.22□□□□□ -1.89
NEK1Q96PY6 SNORD56.5-201ENST00000364281 72 ntBASIC3.22□□□□□ -1.89
NEK1Q96PY6 Y_RNA.553-201ENST00000384670 102 ntBASIC3.22□□□□□ -1.89
NEK1Q96PY6 RNA5SP492-201ENST00000411330 114 ntBASIC3.22□□□□□ -1.89
NEK1Q96PY6 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.22□□□□□ -1.89
NEK1Q96PY6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.22□□□□□ -1.89
NEK1Q96PY6 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.22□□□□□ -1.89
NEK1Q96PY6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.22□□□□□ -1.89
NEK1Q96PY6 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.22□□□□□ -1.89
NEK1Q96PY6 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.22□□□□□ -1.89
NEK1Q96PY6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.22□□□□□ -1.89
NEK1Q96PY6 PGBD4P3-201ENST00000440731 581 ntBASIC3.22□□□□□ -1.89
NEK1Q96PY6 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.22□□□□□ -1.89
NEK1Q96PY6 MTCO1P19-201ENST00000443487 500 ntBASIC3.22□□□□□ -1.89
NEK1Q96PY6 MTND6P13-201ENST00000443510 523 ntBASIC3.22□□□□□ -1.89
NEK1Q96PY6 MTND1P27-201ENST00000451117 902 ntBASIC3.22□□□□□ -1.89
NEK1Q96PY6 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.22□□□□□ -1.89
NEK1Q96PY6 RNA5SP76-201ENST00000516277 87 ntBASIC3.22□□□□□ -1.89
NEK1Q96PY6 RNU2-46P-201ENST00000517038 113 ntBASIC3.22□□□□□ -1.89
NEK1Q96PY6 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NEK1Q96PY6 HSPE1P20-201ENST00000538133 289 ntBASIC3.22□□□□□ -1.89
NEK1Q96PY6 MIR4293-201ENST00000584305 78 ntBASIC3.22□□□□□ -1.89
NEK1Q96PY6 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.22□□□□□ -1.89
NEK1Q96PY6 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.22□□□□□ -1.89
NEK1Q96PY6 NRBF2P5-201ENST00000603087 788 ntBASIC3.22□□□□□ -1.89
NEK1Q96PY6 AC087752.4-201ENST00000605911 462 ntBASIC3.22□□□□□ -1.89
NEK1Q96PY6 AL627309.6-201ENST00000606857 840 ntBASIC3.22□□□□□ -1.89
NEK1Q96PY6 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.22□□□□□ -1.89
NEK1Q96PY6 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.22□□□□□ -1.89
NEK1Q96PY6 AC090132.2-201ENST00000615881 347 ntBASIC3.22□□□□□ -1.89
NEK1Q96PY6 AC048344.4-201ENST00000619744 527 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms