Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 RPL23AP81-201ENST00000455252 467 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 RPL21P93-201ENST00000480465 489 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 HMGB1P30-201ENST00000492455 606 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 AC079140.5-201ENST00000507882 310 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 RNU6-798P-201ENST00000516912 103 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 RNU6-1213P-201ENST00000517075 94 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 RNU6-264P-201ENST00000517134 104 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 AC023632.4-201ENST00000517783 191 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 FAM60DP-201ENST00000524174 632 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 CYP4A43P-201ENST00000568156 121 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 RN7SL703P-201ENST00000578485 302 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 MIR4429-201ENST00000580105 73 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 MIR4286-201ENST00000580651 93 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 AC073539.2-201ENST00000597113 165 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 AC006023.2-201ENST00000609916 167 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 Z69720.2-201ENST00000624755 279 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 AL669831.3-213ENST00000636676 183 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 AL049641.1-201ENST00000441055 1948 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.42□□□□□ -1.86
ZNF48Q96MX3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.42□□□□□ -1.86
ZNF48Q96MX3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.41□□□□□ -1.86
ZNF48Q96MX3 ZNF519P1-201ENST00000449011 1626 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ZNF48Q96MX3 Y_RNA.47-201ENST00000362697 108 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 Y_RNA.135-201ENST00000363439 95 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 RNU6-188P-201ENST00000364207 107 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 RNU6-702P-201ENST00000364982 107 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 SNORD116-11-201ENST00000383882 92 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 Y_RNA.557-201ENST00000384680 107 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 RNU11-4P-201ENST00000391149 133 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ZNF48Q96MX3 AP000567.1-201ENST00000406413 156 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 MIR1302-3-201ENST00000408128 138 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 RNU4-46P-201ENST00000410818 138 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 HMGB3P2-201ENST00000411913 584 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 RHEBP3-201ENST00000411920 351 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.41□□□□□ -1.86
ZNF48Q96MX3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.41□□□□□ -1.86
ZNF48Q96MX3 ATG3P1-201ENST00000419507 911 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 RPL7P46-201ENST00000425129 740 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 USP9YP16-201ENST00000430287 407 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 HMGB1P12-201ENST00000438594 598 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.41□□□□□ -1.86
ZNF48Q96MX3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.41□□□□□ -1.86
ZNF48Q96MX3 RPS24P6-201ENST00000452670 400 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 USP9YP23-201ENST00000455085 407 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.41□□□□□ -1.86
ZNF48Q96MX3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.41□□□□□ -1.86
ZNF48Q96MX3 RN7SL542P-201ENST00000467147 294 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 RN7SL132P-201ENST00000478131 296 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 AF213884.1-201ENST00000488102 463 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 RN7SL283P-201ENST00000489055 303 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.41□□□□□ -1.86
ZNF48Q96MX3 COX7A2P2-201ENST00000505291 250 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ZNF48Q96MX3 RNU6-64P-201ENST00000517119 105 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.41□□□□□ -1.86
ZNF48Q96MX3 IGLV3-26-201ENST00000520756 302 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 IFITM8P-201ENST00000522529 394 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
ZNF48Q96MX3 AL133271.1-201ENST00000538229 291 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.41□□□□□ -1.86
ZNF48Q96MX3 AL121603.1-201ENST00000553815 142 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.41□□□□□ -1.86
ZNF48Q96MX3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.41□□□□□ -1.86
ZNF48Q96MX3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.41□□□□□ -1.86
ZNF48Q96MX3 DUSP12P1-201ENST00000612874 516 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 AC103705.1-201ENST00000619013 241 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 AC034229.5-201ENST00000624258 185 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
ZNF48Q96MX3 AC004925.1-201ENST00000624256 2706 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 API5P2-201ENST00000397055 1498 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
ZNF48Q96MX3 TPTE2P4-201ENST00000258589 1605 ntBASIC3.41□□□□□ -1.86
ZNF48Q96MX3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.4□□□□□ -1.86
ZNF48Q96MX3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
ZNF48Q96MX3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.86
ZNF48Q96MX3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
ZNF48Q96MX3 RNU6-1287P-201ENST00000362914 107 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF48Q96MX3 RNU6-1060P-201ENST00000384664 107 ntBASIC3.4□□□□□ -1.87
ZNF48Q96MX3 RN7SKP202-201ENST00000410439 330 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms