Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 RNU6-1287P-201ENST00000362914 107 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 RNU6-1252P-201ENST00000363054 104 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 SNORD115-7-201ENST00000365306 82 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 SNORA24.1-201ENST00000384401 135 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 RNU6-1160P-201ENST00000384546 104 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 RNU6-1060P-201ENST00000384664 107 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 MT-TC-201ENST00000387405 66 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 UBE2V1P2-201ENST00000397758 440 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 MIR548F5-201ENST00000408421 86 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 RN7SKP159-201ENST00000410657 292 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 Z82205.1-201ENST00000428456 297 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 RPL35AP22-201ENST00000436855 335 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 AC107399.1-201ENST00000451226 265 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 AC110792.1-201ENST00000491826 472 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 HMGB3P15-201ENST00000507326 574 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 MIR5583-1-201ENST00000580941 59 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 BNIP3P25-201ENST00000596023 559 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 AL080274.1-201ENST00000605565 220 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 AC008121.3-201ENST00000618726 433 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 RLIMP1-201ENST00000339626 1680 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 MTND5P19-201ENST00000424872 1794 ntBASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.83□□□□□ -1.8
PDLIM2Q96JY6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AL136964.1-201ENST00000622038 2990 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 MIR372-201ENST00000362225 67 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 Y_RNA.339-201ENST00000365325 102 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 SNORA33.2-201ENST00000365413 134 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 RNU6-213P-201ENST00000384051 104 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 Y_RNA.445-201ENST00000384168 102 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 RNY4P36-201ENST00000391116 96 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 MTCYBP4-201ENST00000401524 249 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AC074085.1-201ENST00000413598 418 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 VN1R36P-201ENST00000414936 291 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 RPL36AP6-201ENST00000435770 321 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AC005094.1-201ENST00000440420 368 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AC008264.1-201ENST00000447612 367 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 RNU7-66P-201ENST00000459469 62 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 RPL23AP67-201ENST00000465341 474 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AL163540.1-201ENST00000485382 386 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 Y_RNA.654-201ENST00000497848 106 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 CCDC34P1-201ENST00000507441 517 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AC104806.1-201ENST00000508720 308 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 RN7SKP21-201ENST00000516503 220 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 RNU6-1088P-201ENST00000516850 104 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 DEFB108D-201ENST00000527787 222 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AL137161.1-201ENST00000532231 390 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 SETP7-201ENST00000552169 453 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AC006270.2-201ENST00000578523 652 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AC024619.4-201ENST00000580924 316 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AP001486.3-201ENST00000615334 372 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 AL161637.1-201ENST00000622380 412 ntBASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDLIM2Q96JY6 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 RNU6-254P-201ENST00000363377 107 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 RNU6-61P-201ENST00000365528 109 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 RNU6-637P-201ENST00000384050 107 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms