Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 RPL7P46-201ENST00000425129 740 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 AC002075.2-201ENST00000425207 252 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 AC091390.3-201ENST00000426478 338 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 RPS29P31-201ENST00000446147 164 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 PRDX3P3-201ENST00000447765 522 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 AL133547.1-201ENST00000448546 220 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 SNRPFP3-201ENST00000457792 225 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 AC018710.1-201ENST00000506509 158 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 AC098591.2-201ENST00000510152 315 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 RNU4-29P-201ENST00000515943 174 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 AC015917.1-201ENST00000579654 510 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 AC006130.2-201ENST00000586202 326 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 AL034408.1-202ENST00000636088 415 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 MTND5P42-201ENST00000637720 498 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 MTND4P14-201ENST00000435799 1354 ntBASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDK5RAP3Q96JB5 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 OR4G1P-203ENST00000641984 1631 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 CUL1P1-201ENST00000509510 2425 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 RNU6-867P-201ENST00000364956 107 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 RNU6-116P-201ENST00000384042 109 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 AL356776.1-201ENST00000406574 447 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 RNA5SP118-201ENST00000410385 109 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 RNA5SP111-201ENST00000411386 101 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 RAB9AP3-201ENST00000412737 573 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 AC138393.2-201ENST00000414742 246 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 OR6C66P-201ENST00000414917 930 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 DBIP2-201ENST00000419076 262 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 NDUFB4P7-201ENST00000423198 363 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 CALM2P2-201ENST00000428512 440 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 AL591212.2-201ENST00000433923 257 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 RAB9AP1-201ENST00000449393 573 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 MTND3P10-201ENST00000450967 341 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 RPL21P8-201ENST00000465083 535 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 RPL38P4-201ENST00000502376 214 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 AC117522.3-201ENST00000507974 584 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 IGHV3-76-201ENST00000522465 295 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 AL163153.1-201ENST00000554223 283 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 AL138976.2-201ENST00000563989 694 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 AL359547.2-201ENST00000615810 418 ntBASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDK5RAP3Q96JB5 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 SNORA72.1-201ENST00000363485 129 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 Y_RNA.160-201ENST00000363677 92 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 SNORA62.3-201ENST00000365110 153 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 RNU6-550P-201ENST00000391057 101 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 SNORA48.8-201ENST00000391324 134 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 CISD1P1-201ENST00000393907 327 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 AL139397.2-201ENST00000404529 772 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 RNU6-193P-201ENST00000410977 107 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 RNU6-373P-201ENST00000411247 98 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 RPS12P24-201ENST00000412619 387 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 TMEM167AP1-201ENST00000423409 219 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 AL158071.1-201ENST00000430315 461 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 RPL36AP53-201ENST00000432891 316 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 HMGB3P8-201ENST00000449709 577 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 MTCYBP18-201ENST00000501056 747 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 AC108043.1-201ENST00000512696 574 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 RNU6-685P-201ENST00000517088 95 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 AC093331.1-201ENST00000521474 169 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 AC004024.1-201ENST00000549244 247 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 AC022893.3-201ENST00000607665 437 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 AC034102.8-201ENST00000615146 484 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 AC090132.2-201ENST00000615881 347 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms