Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
TTC28Q96AY4 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
TTC28Q96AY4 RNU6-16P-201ENST00000384385 107 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 RPS3AP1-201ENST00000413190 320 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.9□□□□□ -2.27
TTC28Q96AY4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.9□□□□□ -2.27
TTC28Q96AY4 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TTC28Q96AY4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC0.9□□□□□ -2.27
TTC28Q96AY4 MIR514B-201ENST00000516774 80 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 AP005597.4-201ENST00000526762 229 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 AC125611.2-201ENST00000551907 647 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.9□□□□□ -2.27
TTC28Q96AY4 AC090666.1-201ENST00000578241 445 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 uc_338.20-201ENST00000621563 178 ntBASIC0.9□□□□□ -2.27
TTC28Q96AY4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
TTC28Q96AY4 RNU6-1243P-201ENST00000364028 107 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 Y_RNA.488-201ENST00000384403 102 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 RNU6-821P-201ENST00000390995 107 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.89□□□□□ -2.27
TTC28Q96AY4 MORF4L1P7-201ENST00000426038 703 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 IFNA20P-201ENST00000436840 528 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 AC097493.1-201ENST00000463958 372 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 PABPC1P3-201ENST00000469174 459 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.89□□□□□ -2.27
TTC28Q96AY4 AC067904.2-201ENST00000517322 1283 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 RPS15AP11-201ENST00000594193 385 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.89□□□□□ -2.27
TTC28Q96AY4 AC092474.3-201ENST00000603022 568 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 AL161734.1-201ENST00000609720 557 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
TTC28Q96AY4 RNA5SP205-201ENST00000364653 136 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 SNORA6-201ENST00000384033 151 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
TTC28Q96AY4 RNU6-837P-201ENST00000391056 108 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 AL136372.1-201ENST00000403060 228 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 FTH1P15-201ENST00000406984 280 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 MTCO3P12-201ENST00000416718 547 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.89□□□□□ -2.27
TTC28Q96AY4 AC009296.1-201ENST00000443146 155 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 AL627224.1-201ENST00000448334 444 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.89□□□□□ -2.27
TTC28Q96AY4 HMGN1P10-201ENST00000474557 553 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 RPF2P2-201ENST00000504693 896 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 AC023141.11-201ENST00000508864 202 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 RNU6-1004P-201ENST00000516584 111 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 MTCO1P47-201ENST00000523889 1271 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 AL355812.1-201ENST00000603215 216 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 AC113368.1-201ENST00000603736 382 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 AC068700.1-201ENST00000565862 3754 ntBASIC0.89□□□□□ -2.27
TTC28Q96AY4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TTC28Q96AY4 RNU6-1305P-201ENST00000364353 104 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 SNORD14B-201ENST00000364533 90 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 RN7SKP51-201ENST00000410781 304 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 MTCYBP34-201ENST00000439552 670 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC0.88□□□□□ -2.27
TTC28Q96AY4 snoU13.4-201ENST00000458916 104 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.88□□□□□ -2.27
TTC28Q96AY4 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.88□□□□□ -2.27
TTC28Q96AY4 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.88□□□□□ -2.27
TTC28Q96AY4 AC117525.1-201ENST00000515228 503 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.88□□□□□ -2.27
TTC28Q96AY4 MED28P6-201ENST00000558776 231 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 AC087465.1-201ENST00000560574 245 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.88□□□□□ -2.27
TTC28Q96AY4 AC023824.2-201ENST00000566185 400 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 AC135178.6-201ENST00000605314 398 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 AC025594.3-201ENST00000613068 790 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 AC245884.12-201ENST00000615364 59 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 AL590410.1-201ENST00000617925 333 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.88□□□□□ -2.27
TTC28Q96AY4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.88□□□□□ -2.27
TTC28Q96AY4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TTC28Q96AY4 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TTC28Q96AY4 Y_RNA.146-201ENST00000363549 102 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 SNORA62.1-201ENST00000364287 154 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC0.88□□□□□ -2.27
TTC28Q96AY4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.88□□□□□ -2.27
TTC28Q96AY4 TPTE2P6-202ENST00000445572 1007 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 AC104057.1-201ENST00000515547 497 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 AC008562.1-201ENST00000521763 330 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TTC28Q96AY4 AC106900.2-201ENST00000604994 317 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 AC073111.2-201ENST00000605657 1075 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 AC117490.2-201ENST00000610042 594 ntBASIC0.88□□□□□ -2.27
TTC28Q96AY4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
TTC28Q96AY4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
TTC28Q96AY4 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC0.87□□□□□ -2.27
TTC28Q96AY4 PRRC2CP1-201ENST00000404428 159 ntBASIC0.87□□□□□ -2.27
TTC28Q96AY4 RNU6-193P-201ENST00000410977 107 ntBASIC0.87□□□□□ -2.27
TTC28Q96AY4 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.87□□□□□ -2.27
TTC28Q96AY4 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
TTC28Q96AY4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.87□□□□□ -2.27
TTC28Q96AY4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.87□□□□□ -2.27
TTC28Q96AY4 RNF2P1-201ENST00000442955 1010 ntBASIC0.87□□□□□ -2.27
TTC28Q96AY4 AL136380.1-201ENST00000447970 162 ntBASIC0.87□□□□□ -2.27
TTC28Q96AY4 RNF138P1-201ENST00000502765 546 ntBASIC0.87□□□□□ -2.27
TTC28Q96AY4 RNU6-287P-201ENST00000516230 98 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms