Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 AC006270.2-201ENST00000578523 652 ntBASIC4.84□□□□□ -1.63
SMARCC1Q92922 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SMARCC1Q92922 AL080274.1-201ENST00000605565 220 ntBASIC4.84□□□□□ -1.63
SMARCC1Q92922 AC116312.1-201ENST00000606841 314 ntBASIC4.84□□□□□ -1.63
SMARCC1Q92922 AC022893.3-201ENST00000607665 437 ntBASIC4.84□□□□□ -1.63
SMARCC1Q92922 AC012409.4-201ENST00000612923 249 ntBASIC4.84□□□□□ -1.63
SMARCC1Q92922 AL450472.3-201ENST00000615578 367 ntBASIC4.84□□□□□ -1.63
SMARCC1Q92922 AL591424.2-201ENST00000617023 128 ntBASIC4.84□□□□□ -1.63
SMARCC1Q92922 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.84□□□□□ -1.63
SMARCC1Q92922 AL773545.4-201ENST00000637262 310 ntBASIC4.84□□□□□ -1.63
SMARCC1Q92922 AL513478.4-201ENST00000641636 310 ntBASIC4.84□□□□□ -1.63
SMARCC1Q92922 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
SMARCC1Q92922 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
SMARCC1Q92922 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SMARCC1Q92922 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SMARCC1Q92922 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.83□□□□□ -1.64
SMARCC1Q92922 AC121333.1-201ENST00000567488 2709 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 MTCO1P24-201ENST00000515438 1558 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 RNU6-738P-201ENST00000384531 106 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 RNU6-1127P-201ENST00000384580 107 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 MIR3074-201ENST00000384885 81 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 MIR513A2-201ENST00000385249 127 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 EIF4E2P1-201ENST00000393781 255 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 RPL5P18-201ENST00000406671 891 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 AL139396.1-201ENST00000421137 167 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.83□□□□□ -1.64
SMARCC1Q92922 RPL21P112-201ENST00000434403 463 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.83□□□□□ -1.64
SMARCC1Q92922 Y_RNA.639-201ENST00000458981 102 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.83□□□□□ -1.64
SMARCC1Q92922 AC090096.1-201ENST00000489168 390 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 RANP9-201ENST00000519957 271 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 APOOP3-201ENST00000536787 586 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.83□□□□□ -1.64
SMARCC1Q92922 OR11H5P-201ENST00000554039 926 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.83□□□□□ -1.64
SMARCC1Q92922 AC138761.3-201ENST00000579993 334 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 SNRPGP17-201ENST00000603780 214 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 AL138889.2-201ENST00000603883 242 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 AL670379.10-201ENST00000604330 253 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 AL670379.9-201ENST00000605428 253 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.83□□□□□ -1.64
SMARCC1Q92922 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.83□□□□□ -1.64
SMARCC1Q92922 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SMARCC1Q92922 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.83□□□□□ -1.64
SMARCC1Q92922 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.83□□□□□ -1.64
SMARCC1Q92922 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMARCC1Q92922 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMARCC1Q92922 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMARCC1Q92922 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.83□□□□□ -1.64
SMARCC1Q92922 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMARCC1Q92922 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SMARCC1Q92922 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.83□□□□□ -1.64
SMARCC1Q92922 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMARCC1Q92922 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SMARCC1Q92922 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SMARCC1Q92922 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.82□□□□□ -1.64
SMARCC1Q92922 SNORA23-201ENST00000365128 182 ntBASIC4.82□□□□□ -1.64
SMARCC1Q92922 AC245054.2-201ENST00000415639 319 ntBASIC4.82□□□□□ -1.64
SMARCC1Q92922 Z82205.1-201ENST00000428456 297 ntBASIC4.82□□□□□ -1.64
SMARCC1Q92922 CALM2P2-201ENST00000428512 440 ntBASIC4.82□□□□□ -1.64
SMARCC1Q92922 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.82□□□□□ -1.64
SMARCC1Q92922 RPL29P29-201ENST00000448725 423 ntBASIC4.82□□□□□ -1.64
SMARCC1Q92922 MRPS31P2-201ENST00000451581 518 ntBASIC4.82□□□□□ -1.64
SMARCC1Q92922 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.82□□□□□ -1.64
SMARCC1Q92922 RN7SL807P-201ENST00000470923 297 ntBASIC4.82□□□□□ -1.64
SMARCC1Q92922 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SMARCC1Q92922 HIGD1AP13-201ENST00000509878 289 ntBASIC4.82□□□□□ -1.64
SMARCC1Q92922 RNU6-1095P-201ENST00000516148 108 ntBASIC4.82□□□□□ -1.64
SMARCC1Q92922 RNA5SP454-201ENST00000517231 127 ntBASIC4.82□□□□□ -1.64
SMARCC1Q92922 AC090281.1-201ENST00000523019 276 ntBASIC4.82□□□□□ -1.64
SMARCC1Q92922 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.82□□□□□ -1.64
SMARCC1Q92922 COPS8P3-201ENST00000526024 482 ntBASIC4.82□□□□□ -1.64
SMARCC1Q92922 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.82□□□□□ -1.64
SMARCC1Q92922 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.82□□□□□ -1.64
SMARCC1Q92922 AC093012.1-202ENST00000549403 582 ntBASIC4.82□□□□□ -1.64
SMARCC1Q92922 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.82□□□□□ -1.64
SMARCC1Q92922 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.82□□□□□ -1.64
SMARCC1Q92922 AL163153.1-201ENST00000554223 283 ntBASIC4.82□□□□□ -1.64
SMARCC1Q92922 AL121576.1-201ENST00000556055 276 ntBASIC4.82□□□□□ -1.64
SMARCC1Q92922 MIR3672-201ENST00000584290 82 ntBASIC4.82□□□□□ -1.64
SMARCC1Q92922 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.82□□□□□ -1.64
SMARCC1Q92922 AL355365.1-201ENST00000616480 294 ntBASIC4.82□□□□□ -1.64
SMARCC1Q92922 MIR6130-201ENST00000619419 109 ntBASIC4.82□□□□□ -1.64
SMARCC1Q92922 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SMARCC1Q92922 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SMARCC1Q92922 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SMARCC1Q92922 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SMARCC1Q92922 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SMARCC1Q92922 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SMARCC1Q92922 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SMARCC1Q92922 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.81□□□□□ -1.64
SMARCC1Q92922 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.81□□□□□ -1.64
SMARCC1Q92922 AC007685.1-201ENST00000329806 452 ntBASIC4.81□□□□□ -1.64
SMARCC1Q92922 SNORD9-201ENST00000362566 104 ntBASIC4.81□□□□□ -1.64
SMARCC1Q92922 RNU6-1155P-201ENST00000363554 107 ntBASIC4.81□□□□□ -1.64
SMARCC1Q92922 AL139039.1-201ENST00000401900 692 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms