Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 MIR892C-201ENST00000516410 77 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 snoZ278.1-201ENST00000517059 112 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 RNU6-1261P-201ENST00000517194 104 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 AC110588.1-201ENST00000559699 137 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 AC122134.1-202ENST00000569111 1201 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 AP001542.2-201ENST00000593141 364 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 AP001429.1-201ENST00000602568 530 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 AC098483.2-201ENST00000603158 454 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 AP000403.1-201ENST00000603349 851 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 AC004067.1-201ENST00000608733 700 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 AC010975.3-201ENST00000618727 978 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 AC109809.1-201ENST00000619665 545 ntBASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CCDC112Q8NEF3 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 SNRPEP3-201ENST00000338402 276 ntBASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 RNU6-609P-201ENST00000365459 107 ntBASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 RNU6-207P-201ENST00000384137 107 ntBASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 MCTS2P-201ENST00000394552 546 ntBASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 SNRPEP2-201ENST00000397592 279 ntBASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 PTGES3P2-201ENST00000407942 482 ntBASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 RPS29P11-201ENST00000496507 171 ntBASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 HSPA8P13-201ENST00000523715 472 ntBASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 AL133241.1-201ENST00000556832 487 ntBASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 AL354696.1-201ENST00000614652 497 ntBASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 AC253576.2-201ENST00000618815 580 ntBASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 AL596245.1-201ENST00000618994 362 ntBASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 AC073592.7-201ENST00000623659 507 ntBASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 AL163152.1-201ENST00000642001 374 ntBASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 HSPA8P4-201ENST00000511877 1920 ntBASIC1.85□□□□□ -2.11
CCDC112Q8NEF3 AC005832.2-201ENST00000538921 1430 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 RNA5SP276-201ENST00000362580 94 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 RNU5B-1-201ENST00000363286 116 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 POLHP1-201ENST00000411806 470 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 CCDC58P2-201ENST00000417131 366 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 RPL30P4-201ENST00000429309 333 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 AL645568.3-201ENST00000433683 316 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 AL096829.2-201ENST00000446582 742 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 MTND2P24-201ENST00000453434 806 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 RPL26P9-201ENST00000457466 433 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 TMEM251P1-201ENST00000503717 318 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 AC020699.1-201ENST00000505161 445 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 AC138915.2-201ENST00000569776 97 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 AL109918.3-201ENST00000603072 338 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 AL035411.2-201ENST00000604022 421 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 AL161729.4-201ENST00000604650 476 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 AC010678.1-201ENST00000614118 713 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 AC084824.4-201ENST00000620106 731 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 AL157770.1-201ENST00000623049 439 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 MIR7157-201ENST00000635801 60 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 MKKS-204ENST00000639674 192 ntBASIC1.84□□□□□ -2.11
CCDC112Q8NEF3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 RNU6-884P-201ENST00000363889 107 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 RNU6-997P-201ENST00000384725 107 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 MIR9-3-201ENST00000385084 90 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 DHFRP6-201ENST00000401776 268 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 RN7SKP158-201ENST00000410453 326 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 RPL23AP39-201ENST00000415533 405 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 MTATP6P27-201ENST00000416987 621 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 AC096920.1-201ENST00000423991 241 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 AC092634.2-201ENST00000428146 1010 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 MTND4P15-201ENST00000437913 1033 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 AC093155.1-201ENST00000440164 826 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 AC016691.1-201ENST00000441321 413 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 OFD1P3Y-201ENST00000453312 783 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 RPL12P25-201ENST00000455592 494 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 MTCO1P42-201ENST00000457379 726 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms