Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 MTCO3P23-201ENST00000561363 289 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 AC009229.3-201ENST00000608056 282 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 AC006157.1-201ENST00000611750 366 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 AL162373.1-201ENST00000620433 407 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 PLCE1P1-201ENST00000622094 305 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 PHKBP1-201ENST00000450951 1951 ntBASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
LINC00116Q8NCU8 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 Y_RNA.47-201ENST00000362697 108 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 Y_RNA.463-201ENST00000384271 102 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 Y_RNA.473-201ENST00000384333 102 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 RPLP0P7-201ENST00000416050 667 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 BX842559.1-201ENST00000419615 532 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 NUP35P1-201ENST00000422734 947 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 AL731563.1-201ENST00000442202 214 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 MTCO3P45-201ENST00000443036 613 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 GAPDHP27-201ENST00000447427 1020 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 RNU7-167P-201ENST00000459160 62 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 AC025518.1-201ENST00000479856 347 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 RNU6-390P-201ENST00000516259 103 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 RNU6-1332P-201ENST00000516666 104 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 RN7SKP82-201ENST00000516786 223 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 Y_RNA.708-201ENST00000516950 96 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 RNU1-54P-201ENST00000517181 120 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 AC012493.2-201ENST00000595083 291 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 AC006254.3-201ENST00000603353 884 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 Z69720.2-201ENST00000624755 279 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 AL732372.2-225ENST00000642124 456 ntBASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.69□□□□□ -1.66
LINC00116Q8NCU8 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 AC093535.2-201ENST00000624769 2326 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 AC093849.1-201ENST00000563631 2209 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 RNU4-35P-201ENST00000362588 141 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 Y_RNA.252-201ENST00000364556 101 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 Y_RNA.399-201ENST00000383955 105 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 RNU6-434P-201ENST00000384376 107 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 RNU6-328P-201ENST00000390887 106 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 RNA5SP424-201ENST00000390988 115 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 AL583834.1-201ENST00000406943 343 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 RNU6-1050P-201ENST00000410388 107 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 RPL21P109-201ENST00000422213 475 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 AL590632.1-201ENST00000424289 371 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 AC015911.1-201ENST00000495111 156 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 HIGD1AP3-201ENST00000515857 278 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 RNU6-1069P-201ENST00000516612 133 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 RNU6-794P-201ENST00000517261 64 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 RNU6-323P-201ENST00000521915 107 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 AC090877.1-201ENST00000561418 344 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 CYP4A43P-201ENST00000568156 121 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 AL137843.1-201ENST00000605078 385 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 AL034351.1-201ENST00000605288 668 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 AC007998.5-201ENST00000622938 237 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 MIR4496-201ENST00000635896 61 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 MTCO1P24-201ENST00000515438 1558 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 AC092435.4-201ENST00000623012 4159 ntBASIC4.68□□□□□ -1.66
LINC00116Q8NCU8 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LINC00116Q8NCU8 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LINC00116Q8NCU8 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.67□□□□□ -1.66
LINC00116Q8NCU8 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LINC00116Q8NCU8 AL137003.2-201ENST00000606924 2538 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms