Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RNU6-1148P-201ENST00000410992 104 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 PPP1R11P2-201ENST00000423543 382 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 AC008850.1-201ENST00000427546 362 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 CYCSP43-201ENST00000438233 310 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 SNRPFP3-201ENST00000457792 225 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 HMGN2P26-201ENST00000463169 339 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 HMGN1P11-201ENST00000508668 303 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 AC104806.1-201ENST00000508720 308 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 AC108078.2-201ENST00000510750 236 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 Y_RNA.675-201ENST00000516389 149 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 RNU7-30P-201ENST00000516835 62 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 AP004242.1-201ENST00000533701 349 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 AC012182.1-201ENST00000570133 895 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 AC067852.3-201ENST00000589177 561 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 AL020997.2-201ENST00000602607 184 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 AL022099.1-201ENST00000604551 712 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 AP001486.3-201ENST00000615334 372 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 MIR8058-201ENST00000615737 89 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 uc_338.11-201ENST00000619132 160 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 AL360181.4-201ENST00000621752 134 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 API5P2-201ENST00000397055 1498 ntBASIC3.22□□□□□ -1.89
CLIP4Q8N3C7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 RNU6-1287P-201ENST00000362914 107 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 Y_RNA.166-201ENST00000363730 102 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 Y_RNA.373-201ENST00000365600 103 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 SMIM11P1-201ENST00000369586 178 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 RNU6-946P-201ENST00000383878 107 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 RNU6-1060P-201ENST00000384664 107 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 MIR514A2-201ENST00000385131 88 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 MIR514A3-201ENST00000385132 88 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 RPL21P17-201ENST00000397467 475 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 UBE2V1P2-201ENST00000397758 440 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 AC110754.1-201ENST00000399740 601 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 MIR1193-201ENST00000408109 78 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 RN7SKP32-201ENST00000410167 303 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 OR6C66P-201ENST00000414917 930 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 NDUFB4P5-201ENST00000415445 361 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 MTCO3P46-201ENST00000425787 232 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 MTCO1P39-201ENST00000426148 480 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 MTND1P14-201ENST00000427400 950 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 AL445584.1-201ENST00000431451 330 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 AL365400.1-201ENST00000431854 640 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 TAAR7P-201ENST00000436141 242 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 IFNA20P-201ENST00000436840 528 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 AC007547.1-201ENST00000462177 490 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 AC112206.3-201ENST00000514578 389 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 SNORA70.19-201ENST00000516717 90 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 MIR2276-201ENST00000516886 89 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 RNU6-1314P-201ENST00000517139 104 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 CBX3P7-201ENST00000532876 502 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 AC004024.1-201ENST00000549244 247 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 OR4H12P-201ENST00000556269 907 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 AL121757.2-201ENST00000611223 313 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 AL121772.2-201ENST00000614331 297 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 AC010133.1-201ENST00000615809 842 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.21□□□□□ -1.9
CLIP4Q8N3C7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLIP4Q8N3C7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLIP4Q8N3C7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
CLIP4Q8N3C7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CLIP4Q8N3C7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.2□□□□□ -1.9
CLIP4Q8N3C7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CLIP4Q8N3C7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLIP4Q8N3C7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms