Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
DEPDC4Q8N2C3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.96□□□□□ -1.61
DEPDC4Q8N2C3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.96□□□□□ -1.61
DEPDC4Q8N2C3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.61
DEPDC4Q8N2C3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.61
DEPDC4Q8N2C3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 Y_RNA.83-201ENST00000363005 113 ntBASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 RNU6-778P-201ENST00000363269 103 ntBASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 SNORA74A-201ENST00000364089 198 ntBASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 RN7SKP153-201ENST00000365026 316 ntBASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 RNU6-937P-201ENST00000384325 106 ntBASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 Y_RNA.602-201ENST00000410535 92 ntBASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 TMSB10P2-201ENST00000416049 131 ntBASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 BMS1P17-202ENST00000416720 316 ntBASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 AC104333.2-201ENST00000422630 192 ntBASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 AL512844.2-201ENST00000433990 593 ntBASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 AC007389.2-201ENST00000434630 306 ntBASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 AC098831.1-201ENST00000440661 216 ntBASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 AC243964.1-201ENST00000441814 261 ntBASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 RPL37P4-201ENST00000448908 268 ntBASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 BX510359.5-201ENST00000515651 304 ntBASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 AC109583.2-201ENST00000617367 129 ntBASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 AC024581.2-201ENST00000619986 252 ntBASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 MIR6839-201ENST00000620425 113 ntBASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
DEPDC4Q8N2C3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 RNU6-222P-201ENST00000362438 107 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 Y_RNA.150-201ENST00000363562 102 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 RNU6-137P-201ENST00000363680 108 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 RN7SKP160-201ENST00000363804 340 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 Y_RNA.464-201ENST00000384282 110 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 RNA5SP213-201ENST00000391031 106 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 AL033519.2-201ENST00000403958 392 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 RPS20P14-201ENST00000412545 360 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 AL355433.1-201ENST00000422804 300 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 RPL23AP95-201ENST00000426806 265 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 AC068287.1-201ENST00000430283 295 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 NDUFB4P6-201ENST00000436819 366 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 RPS15AP7-201ENST00000439294 405 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 AL356535.1-201ENST00000440335 398 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 AL451050.1-201ENST00000450126 415 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 NUTF2P7-201ENST00000453086 375 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 RPL23AP14-201ENST00000468281 468 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 HMGB3P16-201ENST00000508037 287 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 AC023141.12-201ENST00000512399 199 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 IGLV3-30-201ENST00000524362 298 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 AC069307.1-201ENST00000602820 447 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 AP000542.2-201ENST00000623199 6179 ntBASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.95□□□□□ -1.62
DEPDC4Q8N2C3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 SNORA64.1-201ENST00000362600 132 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 RNU6-1279P-201ENST00000383917 103 ntBASIC4.94□□□□□ -1.62
DEPDC4Q8N2C3 RNU6-142P-201ENST00000384019 107 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms