Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RNU6-490P-201ENST00000362985 107 ntBASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 MIR513A2-201ENST00000385249 127 ntBASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 RNU6-293P-201ENST00000411259 106 ntBASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 HMGB3P2-201ENST00000411913 584 ntBASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 RBMY1KP-201ENST00000423480 476 ntBASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 MTCYBP9-201ENST00000431021 303 ntBASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 AL645568.3-201ENST00000433683 316 ntBASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 IGKV2D-23-201ENST00000518179 286 ntBASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 AC006064.5-201ENST00000541782 248 ntBASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 AC022968.1-201ENST00000567372 442 ntBASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 MIR3149-201ENST00000584629 83 ntBASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 AC002545.1-201ENST00000592511 181 ntBASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 ZYXP1-201ENST00000617638 118 ntBASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 Y_RNA.80-201ENST00000362996 102 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 RHOT1P2-201ENST00000366423 333 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 Y_RNA.485-201ENST00000384395 102 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 AL445529.1-201ENST00000398713 389 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 MIR1179-201ENST00000408703 91 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 CYCSP33-201ENST00000414485 327 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 UBE2V1P4-201ENST00000425374 344 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 AC091390.3-201ENST00000426478 338 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 AL158071.1-201ENST00000430315 461 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 NOTCH2P1-201ENST00000443481 624 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 HMGB3P30-201ENST00000457863 606 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 AC010285.1-201ENST00000470580 392 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 RPL31P60-201ENST00000478450 367 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 AF213884.1-201ENST00000488102 463 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 MTCO2P24-201ENST00000515611 426 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 SNORD116.3-201ENST00000517176 78 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 AC069113.1-201ENST00000517763 267 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 AC007224.1-201ENST00000564410 144 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 OR1M4P-201ENST00000589199 287 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 AL020997.2-201ENST00000602607 184 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 AC068724.3-201ENST00000625906 87 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 AL365440.1-201ENST00000436135 2167 ntBASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM48Q8IWZ4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC011266.1-201ENST00000624119 3569 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 RNU6-173P-201ENST00000364215 104 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 Y_RNA.428-201ENST00000384078 102 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 MIR514A1-201ENST00000385133 98 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 RNU2-3P-201ENST00000410144 191 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 RNU6-628P-201ENST00000410675 107 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 RNA5SP104-201ENST00000410989 118 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 RNU6-607P-201ENST00000411283 108 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC096644.2-201ENST00000429278 159 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 NUTF2P7-201ENST00000453086 375 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC092451.1-201ENST00000480211 153 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC110792.1-201ENST00000491826 472 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC022493.1-201ENST00000492984 337 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC099522.1-202ENST00000514718 367 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 RNU6-143P-201ENST00000516942 93 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.12□□□□□ -1.75
TRIM48Q8IWZ4 AC087369.1-201ENST00000520775 996 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms