Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 MTND4P27-201ENST00000450813 1354 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.91□□□□□ -1.62
USP48Q86UV5 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USP48Q86UV5 Y_RNA.128-201ENST00000363391 112 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 SNORD116-29-201ENST00000384516 83 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 U8.11-201ENST00000384699 133 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 U8.12-201ENST00000384701 133 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 MIR559-201ENST00000385188 96 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
USP48Q86UV5 MIR450B-201ENST00000401182 78 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 MTCO2P27-201ENST00000420740 428 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 RPS3AP52-201ENST00000435639 297 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.91□□□□□ -1.62
USP48Q86UV5 HMGB3P22-202ENST00000451823 572 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 U8.18-201ENST00000459285 133 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.91□□□□□ -1.62
USP48Q86UV5 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.91□□□□□ -1.62
USP48Q86UV5 TBCAP3-201ENST00000512475 312 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.91□□□□□ -1.62
USP48Q86UV5 SCARNA15.2-201ENST00000516409 127 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.91□□□□□ -1.62
USP48Q86UV5 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.91□□□□□ -1.62
USP48Q86UV5 FRG2DP-202ENST00000566967 323 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 MIR4790-201ENST00000577799 79 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 MIR3672-201ENST00000584290 82 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 AC023043.2-201ENST00000589678 1026 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 APOOP1-201ENST00000604695 592 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 AL121655.1-201ENST00000605811 308 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 AP002826.1-201ENST00000608835 315 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 AC107294.1-201ENST00000609524 467 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 MIR4727-201ENST00000622232 55 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.91□□□□□ -1.62
USP48Q86UV5 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.91□□□□□ -1.62
USP48Q86UV5 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.91□□□□□ -1.62
USP48Q86UV5 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
USP48Q86UV5 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
USP48Q86UV5 AC018555.1-201ENST00000567548 1980 ntBASIC4.91□□□□□ -1.62
USP48Q86UV5 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
USP48Q86UV5 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.9□□□□□ -1.62
USP48Q86UV5 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.9□□□□□ -1.62
USP48Q86UV5 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
USP48Q86UV5 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
USP48Q86UV5 UBE2L2-201ENST00000254302 429 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 MIR369-201ENST00000362155 70 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 SNORA5A-201ENST00000384111 134 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 Y_RNA.534-201ENST00000384599 112 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
USP48Q86UV5 MIR1179-201ENST00000408703 91 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 RN7SKP177-201ENST00000410567 355 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
USP48Q86UV5 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
USP48Q86UV5 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.9□□□□□ -1.63
USP48Q86UV5 AC006011.1-201ENST00000442758 349 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.9□□□□□ -1.63
USP48Q86UV5 RPL21P41-201ENST00000459863 264 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 VN1R17P-201ENST00000472048 1090 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 RPS15AP34-201ENST00000487776 387 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 AC078817.1-201ENST00000492623 435 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 RN7SL323P-201ENST00000494712 295 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 AC078918.1-201ENST00000498515 228 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 AC005741.1-201ENST00000511094 432 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 APOOP4-201ENST00000513530 597 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 RNU6-1073P-201ENST00000517182 106 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 RNA5SP454-201ENST00000517231 127 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 MIR5692A1-201ENST00000580523 69 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 LINC00901.1-201ENST00000617252 152 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 AC090971.5-201ENST00000621102 293 ntBASIC4.9□□□□□ -1.63
USP48Q86UV5 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.9□□□□□ -1.63
USP48Q86UV5 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
USP48Q86UV5 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USP48Q86UV5 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USP48Q86UV5 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
USP48Q86UV5 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USP48Q86UV5 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
USP48Q86UV5 Y_RNA.146-201ENST00000363549 102 ntBASIC4.89□□□□□ -1.63
USP48Q86UV5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
USP48Q86UV5 RNU6-45P-201ENST00000384471 107 ntBASIC4.89□□□□□ -1.63
USP48Q86UV5 PTMAP5-201ENST00000393073 333 ntBASIC4.89□□□□□ -1.63
USP48Q86UV5 AL139397.2-201ENST00000404529 772 ntBASIC4.89□□□□□ -1.63
USP48Q86UV5 RPS4XP7-201ENST00000406274 780 ntBASIC4.89□□□□□ -1.63
USP48Q86UV5 RPL5P18-201ENST00000406671 891 ntBASIC4.89□□□□□ -1.63
USP48Q86UV5 RN7SKP158-201ENST00000410453 326 ntBASIC4.89□□□□□ -1.63
USP48Q86UV5 AL356867.1-201ENST00000429623 299 ntBASIC4.89□□□□□ -1.63
USP48Q86UV5 RPL23AP69-201ENST00000431134 458 ntBASIC4.89□□□□□ -1.63
USP48Q86UV5 HMGN2P31-201ENST00000432430 273 ntBASIC4.89□□□□□ -1.63
USP48Q86UV5 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.89□□□□□ -1.63
USP48Q86UV5 SNORA59A-201ENST00000459326 152 ntBASIC4.89□□□□□ -1.63
USP48Q86UV5 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.89□□□□□ -1.63
USP48Q86UV5 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.89□□□□□ -1.63
USP48Q86UV5 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.89□□□□□ -1.63
USP48Q86UV5 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.89□□□□□ -1.63
USP48Q86UV5 RNU6-1069P-201ENST00000516612 133 ntBASIC4.89□□□□□ -1.63
USP48Q86UV5 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.89□□□□□ -1.63
USP48Q86UV5 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.89□□□□□ -1.63
USP48Q86UV5 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.89□□□□□ -1.63
USP48Q86UV5 CYCSP27-201ENST00000527643 293 ntBASIC4.89□□□□□ -1.63
USP48Q86UV5 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.89□□□□□ -1.63
USP48Q86UV5 MIR5692C1-201ENST00000585309 91 ntBASIC4.89□□□□□ -1.63
USP48Q86UV5 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms