Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
UBR3Q6ZT12 RNU6-697P-201ENST00000363348 107 ntBASIC0.97□□□□□ -2.25
UBR3Q6ZT12 SNORA23-201ENST00000365128 182 ntBASIC0.97□□□□□ -2.25
UBR3Q6ZT12 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.97□□□□□ -2.25
UBR3Q6ZT12 SNORA81-201ENST00000408493 178 ntBASIC0.97□□□□□ -2.25
UBR3Q6ZT12 SEPT2P1-201ENST00000419651 180 ntBASIC0.97□□□□□ -2.25
UBR3Q6ZT12 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.97□□□□□ -2.25
UBR3Q6ZT12 AC074029.2-201ENST00000551045 634 ntBASIC0.97□□□□□ -2.25
UBR3Q6ZT12 MIR4711-201ENST00000578274 70 ntBASIC0.97□□□□□ -2.25
UBR3Q6ZT12 AL133370.2-201ENST00000619934 439 ntBASIC0.97□□□□□ -2.25
UBR3Q6ZT12 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
UBR3Q6ZT12 AL589743.1-201ENST00000551932 2712 ntBASIC0.97□□□□□ -2.25
UBR3Q6ZT12 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
UBR3Q6ZT12 SNORD26-201ENST00000384147 75 ntBASIC0.97□□□□□ -2.25
UBR3Q6ZT12 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.97□□□□□ -2.25
UBR3Q6ZT12 RPS27AP10-201ENST00000496103 208 ntBASIC0.97□□□□□ -2.25
UBR3Q6ZT12 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.97□□□□□ -2.25
UBR3Q6ZT12 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC0.97□□□□□ -2.25
UBR3Q6ZT12 RNU7-193P-201ENST00000516723 65 ntBASIC0.97□□□□□ -2.25
UBR3Q6ZT12 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.97□□□□□ -2.25
UBR3Q6ZT12 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.97□□□□□ -2.25
UBR3Q6ZT12 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.97□□□□□ -2.25
UBR3Q6ZT12 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.97□□□□□ -2.25
UBR3Q6ZT12 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.97□□□□□ -2.25
UBR3Q6ZT12 AC005786.1-201ENST00000588553 154 ntBASIC0.97□□□□□ -2.25
UBR3Q6ZT12 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.97□□□□□ -2.25
UBR3Q6ZT12 ZNF702P-202ENST00000434269 1966 ntBASIC0.96□□□□□ -2.26
UBR3Q6ZT12 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
UBR3Q6ZT12 NUP35P2-201ENST00000416748 943 ntBASIC0.96□□□□□ -2.26
UBR3Q6ZT12 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.96□□□□□ -2.26
UBR3Q6ZT12 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.96□□□□□ -2.26
UBR3Q6ZT12 AP001960.1-201ENST00000506494 658 ntBASIC0.96□□□□□ -2.26
UBR3Q6ZT12 AC093752.1-206ENST00000511823 336 ntBASIC0.96□□□□□ -2.26
UBR3Q6ZT12 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.96□□□□□ -2.26
UBR3Q6ZT12 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.96□□□□□ -2.26
UBR3Q6ZT12 OR5AL2P-201ENST00000532185 920 ntBASIC0.96□□□□□ -2.26
UBR3Q6ZT12 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.96□□□□□ -2.26
UBR3Q6ZT12 AC133485.1-201ENST00000567176 124 ntBASIC0.96□□□□□ -2.26
UBR3Q6ZT12 AC138907.6-201ENST00000568401 126 ntBASIC0.96□□□□□ -2.26
UBR3Q6ZT12 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.96□□□□□ -2.26
UBR3Q6ZT12 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.96□□□□□ -2.26
UBR3Q6ZT12 LINC02211-204ENST00000642024 1070 ntBASIC0.96□□□□□ -2.26
UBR3Q6ZT12 RNU6-1293P-201ENST00000384077 107 ntBASIC0.95□□□□□ -2.26
UBR3Q6ZT12 RPS15AP40-201ENST00000419621 391 ntBASIC0.95□□□□□ -2.26
UBR3Q6ZT12 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.95□□□□□ -2.26
UBR3Q6ZT12 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.95□□□□□ -2.26
UBR3Q6ZT12 AC108078.1-201ENST00000508073 725 ntBASIC0.95□□□□□ -2.26
UBR3Q6ZT12 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
UBR3Q6ZT12 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.95□□□□□ -2.26
UBR3Q6ZT12 MIR548Y-201ENST00000582739 110 ntBASIC0.95□□□□□ -2.26
UBR3Q6ZT12 RNU6-156P-201ENST00000621869 107 ntBASIC0.95□□□□□ -2.26
UBR3Q6ZT12 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.95□□□□□ -2.26
UBR3Q6ZT12 MTND5P9-201ENST00000503854 1755 ntBASIC0.95□□□□□ -2.26
UBR3Q6ZT12 Y_RNA.115-201ENST00000363272 98 ntBASIC0.95□□□□□ -2.26
UBR3Q6ZT12 Y_RNA.251-201ENST00000364551 99 ntBASIC0.95□□□□□ -2.26
UBR3Q6ZT12 SFR1P2-201ENST00000421841 730 ntBASIC0.95□□□□□ -2.26
UBR3Q6ZT12 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.95□□□□□ -2.26
UBR3Q6ZT12 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.95□□□□□ -2.26
UBR3Q6ZT12 RNU6-970P-201ENST00000516312 107 ntBASIC0.95□□□□□ -2.26
UBR3Q6ZT12 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.95□□□□□ -2.26
UBR3Q6ZT12 AL160236.1-201ENST00000556317 195 ntBASIC0.95□□□□□ -2.26
UBR3Q6ZT12 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.95□□□□□ -2.26
UBR3Q6ZT12 AC079395.3-201ENST00000615161 484 ntBASIC0.95□□□□□ -2.26
UBR3Q6ZT12 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.95□□□□□ -2.26
UBR3Q6ZT12 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.94□□□□□ -2.26
UBR3Q6ZT12 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
UBR3Q6ZT12 CBX3P1-201ENST00000325243 554 ntBASIC0.94□□□□□ -2.26
UBR3Q6ZT12 AL356131.1-201ENST00000405826 414 ntBASIC0.94□□□□□ -2.26
UBR3Q6ZT12 RPL27AP8-201ENST00000424277 446 ntBASIC0.94□□□□□ -2.26
UBR3Q6ZT12 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.94□□□□□ -2.26
UBR3Q6ZT12 AL031274.2-201ENST00000599419 203 ntBASIC0.94□□□□□ -2.26
UBR3Q6ZT12 XIAPP1-201ENST00000603162 600 ntBASIC0.94□□□□□ -2.26
UBR3Q6ZT12 PRR13P7-201ENST00000605538 430 ntBASIC0.94□□□□□ -2.26
UBR3Q6ZT12 AC012213.4-201ENST00000606457 354 ntBASIC0.94□□□□□ -2.26
UBR3Q6ZT12 AC096772.1-201ENST00000609146 564 ntBASIC0.94□□□□□ -2.26
UBR3Q6ZT12 AC010809.3-201ENST00000621310 641 ntBASIC0.94□□□□□ -2.26
UBR3Q6ZT12 MTND4P31-201ENST00000425607 1343 ntBASIC0.94□□□□□ -2.26
UBR3Q6ZT12 AC008163.1-202ENST00000636004 2889 ntBASIC0.93□□□□□ -2.26
UBR3Q6ZT12 RNU6-263P-201ENST00000363811 107 ntBASIC0.93□□□□□ -2.26
UBR3Q6ZT12 U3.20-201ENST00000390909 217 ntBASIC0.93□□□□□ -2.26
UBR3Q6ZT12 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC0.93□□□□□ -2.26
UBR3Q6ZT12 FCF1P2-201ENST00000415284 583 ntBASIC0.93□□□□□ -2.26
UBR3Q6ZT12 AC098614.2-201ENST00000426040 255 ntBASIC0.93□□□□□ -2.26
UBR3Q6ZT12 JTBP1-201ENST00000441314 247 ntBASIC0.93□□□□□ -2.26
UBR3Q6ZT12 snoU13.28-201ENST00000459235 104 ntBASIC0.93□□□□□ -2.26
UBR3Q6ZT12 AC087481.2-201ENST00000565492 330 ntBASIC0.93□□□□□ -2.26
UBR3Q6ZT12 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.93□□□□□ -2.26
UBR3Q6ZT12 AC021749.1-201ENST00000604322 607 ntBASIC0.93□□□□□ -2.26
UBR3Q6ZT12 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
UBR3Q6ZT12 RNU1-72P-201ENST00000362976 153 ntBASIC0.92□□□□□ -2.26
UBR3Q6ZT12 OR6C72P-201ENST00000451403 892 ntBASIC0.92□□□□□ -2.26
UBR3Q6ZT12 AC023141.11-201ENST00000508864 202 ntBASIC0.92□□□□□ -2.26
UBR3Q6ZT12 AC112198.4-201ENST00000515450 351 ntBASIC0.92□□□□□ -2.26
UBR3Q6ZT12 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.92□□□□□ -2.26
UBR3Q6ZT12 AC118273.2-201ENST00000532092 465 ntBASIC0.92□□□□□ -2.26
UBR3Q6ZT12 AC087359.1-201ENST00000508335 1740 ntBASIC0.92□□□□□ -2.26
UBR3Q6ZT12 RNA5SP499-201ENST00000363982 119 ntBASIC0.92□□□□□ -2.26
UBR3Q6ZT12 MTCO3P4-201ENST00000419236 787 ntBASIC0.92□□□□□ -2.26
UBR3Q6ZT12 OFD1P12Y-201ENST00000427963 1207 ntBASIC0.92□□□□□ -2.26
UBR3Q6ZT12 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms