Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
COLCA1Q6ZS62 AC090971.5-201ENST00000621102 293 ntBASIC3.33□□□□□ -1.88
COLCA1Q6ZS62 AL589994.2-201ENST00000621124 579 ntBASIC3.33□□□□□ -1.88
COLCA1Q6ZS62 AL353748.2-201ENST00000622148 471 ntBASIC3.33□□□□□ -1.88
COLCA1Q6ZS62 AC110801.1-201ENST00000623590 212 ntBASIC3.33□□□□□ -1.88
COLCA1Q6ZS62 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COLCA1Q6ZS62 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COLCA1Q6ZS62 AC116096.1-201ENST00000566804 2314 ntBASIC3.33□□□□□ -1.88
COLCA1Q6ZS62 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
COLCA1Q6ZS62 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
COLCA1Q6ZS62 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COLCA1Q6ZS62 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COLCA1Q6ZS62 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.33□□□□□ -1.88
COLCA1Q6ZS62 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
COLCA1Q6ZS62 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 RNU6-1249P-201ENST00000363237 111 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 RNU6-254P-201ENST00000363377 107 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 RNA5SP97-201ENST00000365006 84 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 RNU6-1297P-201ENST00000384415 104 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 RNU6-738P-201ENST00000384531 106 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 RNY4P36-201ENST00000391116 96 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 HMGN2P8-201ENST00000391458 268 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 MIR548P-201ENST00000408336 84 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 RN7SKP158-201ENST00000410453 326 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 PPP1R11P2-201ENST00000423543 382 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 SKA2P1-201ENST00000425592 390 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 Z82205.1-201ENST00000428456 297 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 AC005019.1-201ENST00000436455 431 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 AC234775.1-201ENST00000454247 670 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 SCARNA18-201ENST00000459004 134 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 RPL21P8-201ENST00000465083 535 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 FTH1P2-201ENST00000466086 412 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 AC027575.1-201ENST00000481064 460 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 TRBVA-201ENST00000498804 316 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 MTND5P5-201ENST00000503764 376 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 RNA5SP164-201ENST00000516533 110 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 RNU6-566P-201ENST00000516790 107 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 AC103783.1-201ENST00000520506 373 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 AC120057.2-201ENST00000571520 271 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 MIR4474-201ENST00000579189 78 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 BNIP3P22-201ENST00000593399 556 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 AC007619.2-201ENST00000605743 379 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 AC012409.4-201ENST00000612923 249 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 AC103705.1-201ENST00000619013 241 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 DDX10P1-201ENST00000448545 1933 ntBASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.32□□□□□ -1.88
COLCA1Q6ZS62 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 AL136164.4-201ENST00000625013 2135 ntBASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 Y_RNA.128-201ENST00000363391 112 ntBASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 SNORA23-201ENST00000365128 182 ntBASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 RNA5SP283-201ENST00000365604 119 ntBASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 SNORA16.2-201ENST00000390991 127 ntBASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 AC110754.1-201ENST00000399740 601 ntBASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 NDUFS5P1-201ENST00000405668 289 ntBASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 RPL5P18-201ENST00000406671 891 ntBASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 RNU6-387P-201ENST00000411331 105 ntBASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 BX682237.1-201ENST00000415016 335 ntBASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 AC092809.3-201ENST00000415453 231 ntBASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 RPL17P36-201ENST00000420302 549 ntBASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 AC099677.1-201ENST00000420575 175 ntBASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 CALM2P2-201ENST00000428512 440 ntBASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 Y_RNA.635-201ENST00000459041 101 ntBASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 AC026801.2-201ENST00000515352 425 ntBASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 RNU6-123P-201ENST00000516163 102 ntBASIC3.31□□□□□ -1.88
COLCA1Q6ZS62 RNU6-1045P-201ENST00000516321 107 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms