Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AC097473.1-201ENST00000508142 408 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 VWA8P1-201ENST00000510889 176 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 SCARNA15.2-201ENST00000516409 127 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 SNORA67.7-201ENST00000516664 135 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 Y_RNA.708-201ENST00000516950 96 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 AC016925.2-201ENST00000605108 242 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 MIR7151-201ENST00000617477 60 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 RMST_9.1-201ENST00000619945 193 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 AC103858.2-201ENST00000621471 543 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 AL669831.3-213ENST00000636676 183 ntBASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.63□□□□□ -1.67
RUFY4Q6ZNE9 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 UBE2L2-201ENST00000254302 429 ntBASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 RNU6-266P-201ENST00000364225 107 ntBASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 RNU6-310P-201ENST00000384655 107 ntBASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 PTMAP2-201ENST00000397627 327 ntBASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 RPL21P90-201ENST00000415692 466 ntBASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 RPL31P12-201ENST00000422587 358 ntBASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 PMCHL1-202ENST00000423102 261 ntBASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 AC079780.1-201ENST00000428259 207 ntBASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 MRPS31P2-201ENST00000451581 518 ntBASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 AC010285.1-201ENST00000470580 392 ntBASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 AC096745.1-201ENST00000509945 370 ntBASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 AL359273.1-201ENST00000510918 627 ntBASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 AC087369.1-201ENST00000520775 996 ntBASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 AC053481.4-201ENST00000583164 216 ntBASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 AC002545.1-201ENST00000592511 181 ntBASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 AC019193.3-201ENST00000609144 554 ntBASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 MIR6128-201ENST00000615528 109 ntBASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 PISRT1.1-201ENST00000616930 107 ntBASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 AC005183.1-201ENST00000603687 1979 ntBASIC4.62□□□□□ -1.67
RUFY4Q6ZNE9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 AC007823.1-201ENST00000569932 1566 ntBASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 Y_RNA.216-201ENST00000364205 93 ntBASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 SNORA22B-201ENST00000383876 138 ntBASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 RNA5SP171-201ENST00000391071 115 ntBASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 RNU6-1304P-201ENST00000411374 106 ntBASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 CYCSP19-201ENST00000411715 316 ntBASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 RPL7P37-201ENST00000425095 738 ntBASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 AL356867.1-201ENST00000429623 299 ntBASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 MTCO3P10-201ENST00000455912 772 ntBASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 AC104472.2-201ENST00000469035 601 ntBASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 RPS20P22-201ENST00000473700 357 ntBASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 AC009901.1-201ENST00000506703 541 ntBASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 AC008716.1-201ENST00000511084 513 ntBASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 RNU1-45P-201ENST00000517191 141 ntBASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 AC063950.1-201ENST00000552036 308 ntBASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 LRRC37A5P-203ENST00000580181 585 ntBASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 MIR6075-201ENST00000620782 95 ntBASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 AC016588.2-201ENST00000632484 3021 ntBASIC4.61□□□□□ -1.67
RUFY4Q6ZNE9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 ZNF285B-201ENST00000561698 1767 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 SNORD62.1-201ENST00000362541 86 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 222.6 ms