Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RNU6-778P-201ENST00000363269 103 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 SNORD56.5-201ENST00000364281 72 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 RPL5P18-201ENST00000406671 891 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 RN7SKP58-201ENST00000411010 305 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 BMS1P22-201ENST00000414726 313 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 AL353729.1-201ENST00000425044 720 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 AC093151.1-201ENST00000427711 313 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 AL591212.2-201ENST00000433923 257 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 AL136380.1-201ENST00000447970 162 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 AC093899.1-201ENST00000457984 376 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 SNORD19.2-201ENST00000516978 73 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 RNA5SP337-201ENST00000517007 109 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 AP003033.1-201ENST00000527244 415 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 ROCK1P1-201ENST00000573767 549 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 AC007363.1-201ENST00000604736 620 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 AC103710.2-201ENST00000609912 942 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 AL442067.2-201ENST00000614033 363 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 AC104010.1-201ENST00000616889 150 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 MTND5P42-201ENST00000637720 498 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 AL353743.1-202ENST00000431724 1695 ntBASIC2.75□□□□□ -1.97
NHLRC1Q6VVB1 MTND4P35-201ENST00000604257 1375 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 RNU6-288P-201ENST00000363690 104 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 RNU6-1180P-201ENST00000364935 107 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 SNORD15B-201ENST00000384714 146 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 AL512633.1-201ENST00000399931 655 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 RNU2-25P-201ENST00000411041 191 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 USP9YP6-201ENST00000413550 854 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 USP9YP28-201ENST00000435142 589 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 RPS24P1-201ENST00000438550 371 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 EPS15P1-201ENST00000448836 336 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 NIPA2P5-201ENST00000452282 464 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 RPS27AP8-201ENST00000452665 445 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 RPS27AP10-201ENST00000496103 208 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 Y_RNA.655-201ENST00000515919 96 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 COX6CP5-201ENST00000527162 228 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 AC010546.1-201ENST00000569391 485 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 MIR3915-201ENST00000578518 97 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 AC103810.1-201ENST00000579873 453 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 MIR3616-201ENST00000584070 92 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 AC078899.3-201ENST00000599065 212 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 AC012065.4-201ENST00000602445 679 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 NRBF2P5-201ENST00000603087 788 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 AC007619.2-201ENST00000605743 379 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 AL391813.2-201ENST00000609113 322 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 AL449363.1-201ENST00000617815 186 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 AL512643.1-201ENST00000635735 524 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 U2.21-201ENST00000637295 81 ntBASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
NHLRC1Q6VVB1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 GNG5P1-201ENST00000255500 204 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 RNU4-91P-201ENST00000364778 135 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 RNU6-1083P-201ENST00000384022 107 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 Y_RNA.436-201ENST00000384097 102 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 RNU6-658P-201ENST00000384606 106 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 MIR627-201ENST00000384979 97 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 U3.19-201ENST00000390893 196 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 RPL23AP32-201ENST00000395315 459 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 AL122016.1-201ENST00000403365 367 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 AL589872.1-201ENST00000426602 288 ntBASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.73□□□□□ -1.97
NHLRC1Q6VVB1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms