Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 HMGB1P41-201ENST00000520234 440 ntBASIC3.84□□□□□ -1.79
SYCE2Q6PIF2 AP005902.1-201ENST00000521358 186 ntBASIC3.84□□□□□ -1.79
SYCE2Q6PIF2 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SYCE2Q6PIF2 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.84□□□□□ -1.79
SYCE2Q6PIF2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.84□□□□□ -1.79
SYCE2Q6PIF2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.84□□□□□ -1.79
SYCE2Q6PIF2 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.84□□□□□ -1.79
SYCE2Q6PIF2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.84□□□□□ -1.79
SYCE2Q6PIF2 AC018552.3-201ENST00000567416 561 ntBASIC3.84□□□□□ -1.79
SYCE2Q6PIF2 MIR4790-201ENST00000577799 79 ntBASIC3.84□□□□□ -1.79
SYCE2Q6PIF2 MIR3146-201ENST00000580367 79 ntBASIC3.84□□□□□ -1.79
SYCE2Q6PIF2 CYP2C61P-201ENST00000604072 290 ntBASIC3.84□□□□□ -1.79
SYCE2Q6PIF2 uc_338.11-201ENST00000619132 160 ntBASIC3.84□□□□□ -1.79
SYCE2Q6PIF2 AL162373.1-201ENST00000620433 407 ntBASIC3.84□□□□□ -1.79
SYCE2Q6PIF2 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.84□□□□□ -1.79
SYCE2Q6PIF2 AC244205.2-202ENST00000635781 342 ntBASIC3.84□□□□□ -1.79
SYCE2Q6PIF2 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.84□□□□□ -1.79
SYCE2Q6PIF2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SYCE2Q6PIF2 Z73965.1-201ENST00000623412 2297 ntBASIC3.84□□□□□ -1.79
SYCE2Q6PIF2 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SYCE2Q6PIF2 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SYCE2Q6PIF2 MTND5P28-201ENST00000438005 1594 ntBASIC3.84□□□□□ -1.8
SYCE2Q6PIF2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.84□□□□□ -1.8
SYCE2Q6PIF2 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SYCE2Q6PIF2 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SYCE2Q6PIF2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SYCE2Q6PIF2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SYCE2Q6PIF2 AL049641.1-201ENST00000441055 1948 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 Y_RNA.153-201ENST00000363615 91 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 SNORA38.1-201ENST00000364172 131 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 SNORA62.1-201ENST00000364287 154 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 RNU6-921P-201ENST00000384361 107 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 RNU6-310P-201ENST00000384655 107 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 RNA5SP424-201ENST00000390988 115 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 AL606923.1-201ENST00000406616 190 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 RNU2-36P-201ENST00000410361 191 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 SKA2P1-201ENST00000425592 390 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 TXNP1-201ENST00000441872 371 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 AC068781.1-201ENST00000488231 618 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 AC020893.1-201ENST00000502452 580 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 SNORA70.14-201ENST00000516205 110 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 RNU6-566P-201ENST00000516790 107 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 AP003497.1-201ENST00000528472 562 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 MYL12BP1-201ENST00000569826 507 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 MIR4424-201ENST00000585257 86 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 AL732372.2-225ENST00000642124 456 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 TAB3P1-202ENST00000452645 1634 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 MTND5P10-201ENST00000603719 1809 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 BDP1P-201ENST00000582658 1990 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 AC004972.1-201ENST00000623934 2209 ntBASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYCE2Q6PIF2 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 RNU6-444P-201ENST00000383988 108 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 RNU4-70P-201ENST00000384579 139 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 Y_RNA.530-201ENST00000384587 101 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 MIR548I3-201ENST00000408378 149 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 MIR548I1-201ENST00000408810 149 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 RNA5SP239-201ENST00000410218 129 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 Y_RNA.646-201ENST00000410980 101 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 AC074085.1-201ENST00000413598 418 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 RPL7P10-201ENST00000417407 739 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 AC048351.1-201ENST00000420064 602 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 AC018865.2-201ENST00000423631 129 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 AC008267.5-201ENST00000424928 265 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 AC096644.2-201ENST00000429278 159 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 MTATP6P16-201ENST00000434543 526 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 HMGB1P12-201ENST00000438594 598 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 AL354710.1-201ENST00000453641 246 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 AC104308.1-201ENST00000454621 333 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 AC055855.1-201ENST00000489563 579 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 RPL7P23-201ENST00000493874 747 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 RNU6-635P-201ENST00000516651 102 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 RNU6-347P-201ENST00000516658 105 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 AC005357.1-201ENST00000588399 301 ntBASIC3.82□□□□□ -1.8
SYCE2Q6PIF2 AC012493.2-201ENST00000595083 291 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms