Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 SNORA5B-201ENST00000363786 132 ntBASIC2.5□□□□□ -2.01
ATL3Q6DD88 RN7SKP226-201ENST00000364912 300 ntBASIC2.5□□□□□ -2.01
ATL3Q6DD88 RNU6-140P-201ENST00000384566 108 ntBASIC2.5□□□□□ -2.01
ATL3Q6DD88 MIR221-201ENST00000385135 110 ntBASIC2.5□□□□□ -2.01
ATL3Q6DD88 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.5□□□□□ -2.01
ATL3Q6DD88 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.5□□□□□ -2.01
ATL3Q6DD88 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.5□□□□□ -2.01
ATL3Q6DD88 RPL17P12-201ENST00000413391 526 ntBASIC2.5□□□□□ -2.01
ATL3Q6DD88 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
ATL3Q6DD88 UBE2FP1-201ENST00000416536 447 ntBASIC2.5□□□□□ -2.01
ATL3Q6DD88 MTND1P23-201ENST00000416931 372 ntBASIC2.5□□□□□ -2.01
ATL3Q6DD88 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.5□□□□□ -2.01
ATL3Q6DD88 USP9YP26-201ENST00000421008 661 ntBASIC2.5□□□□□ -2.01
ATL3Q6DD88 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.5□□□□□ -2.01
ATL3Q6DD88 AL022400.1-201ENST00000423946 935 ntBASIC2.5□□□□□ -2.01
ATL3Q6DD88 GTF2IP20-201ENST00000431663 360 ntBASIC2.5□□□□□ -2.01
ATL3Q6DD88 LARP1BP3-201ENST00000437229 869 ntBASIC2.5□□□□□ -2.01
ATL3Q6DD88 AL831737.1-201ENST00000441288 271 ntBASIC2.5□□□□□ -2.01
ATL3Q6DD88 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.5□□□□□ -2.01
ATL3Q6DD88 AL118520.1-201ENST00000450770 291 ntBASIC2.5□□□□□ -2.01
ATL3Q6DD88 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.5□□□□□ -2.01
ATL3Q6DD88 AC104685.1-201ENST00000502445 371 ntBASIC2.5□□□□□ -2.01
ATL3Q6DD88 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ATL3Q6DD88 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.5□□□□□ -2.01
ATL3Q6DD88 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ATL3Q6DD88 SNRPGP18-201ENST00000553000 214 ntBASIC2.5□□□□□ -2.01
ATL3Q6DD88 AC018714.1-201ENST00000605028 208 ntBASIC2.5□□□□□ -2.01
ATL3Q6DD88 SDR42E1P2-201ENST00000614861 481 ntBASIC2.5□□□□□ -2.01
ATL3Q6DD88 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
ATL3Q6DD88 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.5□□□□□ -2.01
ATL3Q6DD88 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
ATL3Q6DD88 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
ATL3Q6DD88 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
ATL3Q6DD88 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
ATL3Q6DD88 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ATL3Q6DD88 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ATL3Q6DD88 RNU6-1214P-201ENST00000363650 109 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
ATL3Q6DD88 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
ATL3Q6DD88 AL139397.2-201ENST00000404529 772 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.49□□□□□ -2.01
ATL3Q6DD88 USP9YP13-201ENST00000417797 480 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.49□□□□□ -2.01
ATL3Q6DD88 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.49□□□□□ -2.01
ATL3Q6DD88 AL445687.1-201ENST00000439946 251 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 MTATP6P30-201ENST00000443540 664 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 DPPA3P1-201ENST00000448050 469 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.49□□□□□ -2.01
ATL3Q6DD88 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.49□□□□□ -2.01
ATL3Q6DD88 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.49□□□□□ -2.01
ATL3Q6DD88 MRPS17P3-201ENST00000465453 385 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 AC010631.1-201ENST00000474150 156 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.49□□□□□ -2.01
ATL3Q6DD88 MRPL42P6-201ENST00000486397 371 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 AL160314.1-201ENST00000490836 438 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.49□□□□□ -2.01
ATL3Q6DD88 HMGB3P3-201ENST00000510526 400 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.49□□□□□ -2.01
ATL3Q6DD88 RN7SKP265-201ENST00000516448 223 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 SCARNA11.3-201ENST00000517276 130 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 COX6CP5-201ENST00000527162 228 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 AC068587.4-201ENST00000533893 186 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.49□□□□□ -2.01
ATL3Q6DD88 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.49□□□□□ -2.01
ATL3Q6DD88 AC090888.2-201ENST00000559765 1144 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.49□□□□□ -2.01
ATL3Q6DD88 AC106782.4-201ENST00000568264 210 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 AL357094.1-201ENST00000603845 844 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 AC136601.2-201ENST00000604356 474 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 AL355472.4-201ENST00000610233 626 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 AC112204.3-201ENST00000623822 332 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 MIR203B-201ENST00000636080 86 ntBASIC2.49□□□□□ -2.01
ATL3Q6DD88 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.49□□□□□ -2.01
ATL3Q6DD88 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.49□□□□□ -2.01
ATL3Q6DD88 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.49□□□□□ -2.01
ATL3Q6DD88 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
ATL3Q6DD88 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
ATL3Q6DD88 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ATL3Q6DD88 AL139276.1-201ENST00000311910 1001 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 FTLP6-201ENST00000355274 422 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 RNU6-461P-201ENST00000364195 107 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 Y_RNA.302-201ENST00000364997 102 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
ATL3Q6DD88 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.48□□□□□ -2.01
ATL3Q6DD88 AL122016.1-201ENST00000403365 367 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 AC078974.1-201ENST00000411597 223 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.48□□□□□ -2.01
ATL3Q6DD88 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.48□□□□□ -2.01
ATL3Q6DD88 AC007919.1-201ENST00000429380 217 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 WARS2P1-201ENST00000429678 537 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.48□□□□□ -2.01
ATL3Q6DD88 UBE2FP3-201ENST00000436366 524 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 RPL7P36-201ENST00000444633 681 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 AL591719.1-201ENST00000444669 744 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.48□□□□□ -2.01
ATL3Q6DD88 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.48□□□□□ -2.01
ATL3Q6DD88 AC013267.1-201ENST00000458227 267 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 AC025033.1-201ENST00000463883 194 ntBASIC2.48□□□□□ -2.01
ATL3Q6DD88 MTND2P14-201ENST00000482139 351 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms