Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.36□□□□□ -1.71
E4F1Q66K89 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
E4F1Q66K89 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
E4F1Q66K89 AC004925.1-201ENST00000624256 2706 ntBASIC4.36□□□□□ -1.71
E4F1Q66K89 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.36□□□□□ -1.71
E4F1Q66K89 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
E4F1Q66K89 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
E4F1Q66K89 SNORD62.1-201ENST00000362541 86 ntBASIC4.35□□□□□ -1.71
E4F1Q66K89 MIR578-201ENST00000384828 96 ntBASIC4.35□□□□□ -1.71
E4F1Q66K89 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
E4F1Q66K89 RPL37P18-201ENST00000411602 243 ntBASIC4.35□□□□□ -1.71
E4F1Q66K89 AL513331.1-201ENST00000411908 397 ntBASIC4.35□□□□□ -1.71
E4F1Q66K89 RPL23AP46-201ENST00000438548 490 ntBASIC4.35□□□□□ -1.71
E4F1Q66K89 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.35□□□□□ -1.71
E4F1Q66K89 RNU7-138P-201ENST00000459479 64 ntBASIC4.35□□□□□ -1.71
E4F1Q66K89 RN7SL271P-201ENST00000487601 295 ntBASIC4.35□□□□□ -1.71
E4F1Q66K89 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.35□□□□□ -1.71
E4F1Q66K89 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
E4F1Q66K89 RNU6-1137P-201ENST00000517073 99 ntBASIC4.35□□□□□ -1.71
E4F1Q66K89 CDH12P4-201ENST00000517835 295 ntBASIC4.35□□□□□ -1.71
E4F1Q66K89 CDH12P3-201ENST00000517935 295 ntBASIC4.35□□□□□ -1.71
E4F1Q66K89 CDH12P1-201ENST00000518435 295 ntBASIC4.35□□□□□ -1.71
E4F1Q66K89 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.35□□□□□ -1.71
E4F1Q66K89 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.35□□□□□ -1.71
E4F1Q66K89 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.35□□□□□ -1.71
E4F1Q66K89 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.35□□□□□ -1.71
E4F1Q66K89 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.35□□□□□ -1.71
E4F1Q66K89 MIR548AC-201ENST00000585049 88 ntBASIC4.35□□□□□ -1.71
E4F1Q66K89 AL121655.1-201ENST00000605811 308 ntBASIC4.35□□□□□ -1.71
E4F1Q66K89 AC011944.2-201ENST00000624440 683 ntBASIC4.35□□□□□ -1.71
E4F1Q66K89 Z99571.1-201ENST00000636677 394 ntBASIC4.35□□□□□ -1.71
E4F1Q66K89 AL732372.2-225ENST00000642124 456 ntBASIC4.35□□□□□ -1.71
E4F1Q66K89 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
E4F1Q66K89 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
E4F1Q66K89 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
E4F1Q66K89 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
E4F1Q66K89 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.34□□□□□ -1.71
E4F1Q66K89 RNU6-1309P-201ENST00000363305 108 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 SNORD35B-201ENST00000363660 87 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 RNU6-512P-201ENST00000364438 103 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 U3.15-201ENST00000365398 212 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 RNA5SP366-201ENST00000365454 123 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 RNU6-328P-201ENST00000390887 106 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.34□□□□□ -1.71
E4F1Q66K89 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.34□□□□□ -1.71
E4F1Q66K89 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.34□□□□□ -1.71
E4F1Q66K89 AC073063.1-201ENST00000434352 607 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.34□□□□□ -1.71
E4F1Q66K89 snoU13.1-201ENST00000459157 104 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 AC010285.1-201ENST00000470580 392 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 AC092451.1-201ENST00000480211 153 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 RN7SL459P-201ENST00000481078 302 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.34□□□□□ -1.71
E4F1Q66K89 AC092436.3-201ENST00000511788 257 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 RNU6-927P-201ENST00000516199 100 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 RNA5SP471-201ENST00000516971 106 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 AC069113.1-201ENST00000517763 267 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 AC009902.1-201ENST00000519351 183 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.34□□□□□ -1.71
E4F1Q66K89 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
E4F1Q66K89 RNU6-85P-201ENST00000605989 107 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 AL161423.1-201ENST00000613700 262 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 PLCE1P1-201ENST00000622094 305 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 AL031601.2-202ENST00000622650 282 ntBASIC4.34□□□□□ -1.71
E4F1Q66K89 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
E4F1Q66K89 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
E4F1Q66K89 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
E4F1Q66K89 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
E4F1Q66K89 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.33□□□□□ -1.72
E4F1Q66K89 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
E4F1Q66K89 AC006504.1-201ENST00000562493 3666 ntBASIC4.33□□□□□ -1.72
E4F1Q66K89 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
E4F1Q66K89 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
E4F1Q66K89 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
E4F1Q66K89 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.33□□□□□ -1.72
E4F1Q66K89 MTND5P30-201ENST00000452896 1731 ntBASIC4.33□□□□□ -1.72
E4F1Q66K89 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
E4F1Q66K89 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
E4F1Q66K89 Y_RNA.2-201ENST00000362330 96 ntBASIC4.33□□□□□ -1.72
E4F1Q66K89 AC117470.1-201ENST00000381974 330 ntBASIC4.33□□□□□ -1.72
E4F1Q66K89 Y_RNA.534-201ENST00000384599 112 ntBASIC4.33□□□□□ -1.72
E4F1Q66K89 RNU6-293P-201ENST00000411259 106 ntBASIC4.33□□□□□ -1.72
E4F1Q66K89 AC011933.1-201ENST00000413334 321 ntBASIC4.33□□□□□ -1.72
E4F1Q66K89 Z99755.1-201ENST00000414048 380 ntBASIC4.33□□□□□ -1.72
E4F1Q66K89 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.33□□□□□ -1.72
E4F1Q66K89 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.33□□□□□ -1.72
E4F1Q66K89 MCFD2P1-201ENST00000417812 300 ntBASIC4.33□□□□□ -1.72
E4F1Q66K89 HMGB1P9-201ENST00000429856 646 ntBASIC4.33□□□□□ -1.72
E4F1Q66K89 USP9YP30-201ENST00000430729 455 ntBASIC4.33□□□□□ -1.72
E4F1Q66K89 HSPD1P21-201ENST00000436541 245 ntBASIC4.33□□□□□ -1.72
E4F1Q66K89 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.33□□□□□ -1.72
E4F1Q66K89 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.33□□□□□ -1.72
E4F1Q66K89 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.33□□□□□ -1.72
E4F1Q66K89 AL360271.2-201ENST00000447710 161 ntBASIC4.33□□□□□ -1.72
E4F1Q66K89 SNORD108-201ENST00000459332 71 ntBASIC4.33□□□□□ -1.72
E4F1Q66K89 RPL31P60-201ENST00000478450 367 ntBASIC4.33□□□□□ -1.72
E4F1Q66K89 AC110792.1-201ENST00000491826 472 ntBASIC4.33□□□□□ -1.72
E4F1Q66K89 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.33□□□□□ -1.72
E4F1Q66K89 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.33□□□□□ -1.72
E4F1Q66K89 RNU6-143P-201ENST00000516942 93 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms